| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2002 |
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| Symbol | |
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| ID | 5694842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2424680 |
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| End bp | 2425168 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264600 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001529883 |
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| Protein GI | 158522013 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0151036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACATT TTGTCAAAGC CCTGATCAGC CAGCTGGCCG ACAAGGCCAA CTGGCTGGCC
GGGGCATCCA TTGTGGCCAT GATGATGGTC ACCGTGATCG ACGTGGTGCT CCGGTTTTTC
CGGTGCCCCA TACCCGGCAC CTACGACGTG GTGGGCCTGC TGGGGGCACT GGCCATTTCG
CTTTCCCTGG GCTACACATC GGCCCAGAAA GGCCACATTG CCGTTGATTT TCTGGTTTCC
CGGTTTTCCG AAAAAGTGGC GCGCGGTATT CACCTGTTCA ACAACCTGGT GGCCACGGTT
TTTTTTGCCG CCGTCTCCTG GCAGTGTCTT CTCTACGCGG CCAGCCTGAA GCGGGCCGGT
GAGGTCTCGC CCACCCTGAA GCTGCCGACC TATCCGTTTC TTATCGGCAT AGCGGCGGGG
TTTATTCTGC TCTGTTGCGT GCTGCTGGCA GAGAGCGTGC AGTCTTCACC GGCAAAGGGG
GGGAAATGA
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| Protein sequence | MGHFVKALIS QLADKANWLA GASIVAMMMV TVIDVVLRFF RCPIPGTYDV VGLLGALAIS
LSLGYTSAQK GHIAVDFLVS RFSEKVARGI HLFNNLVATV FFAAVSWQCL LYAASLKRAG
EVSPTLKLPT YPFLIGIAAG FILLCCVLLA ESVQSSPAKG GK
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