Gene Dole_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1993 
Symbol 
ID5694833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2411498 
End bp2411905 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content53% 
IMG OID641264591 
ProductTM2 domain-containing protein 
Protein accessionYP_001529874 
Protein GI158522004 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0383529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACT CCAACGACAC TCACATGAAG ACCTTCGGCT ACATTCTCTG GCTGTTCGGA 
TTTACCGGCT CCCACCGGTT TTACTACGGC AGGCCCATCA CCGGCGCCAT CTGGTTTTTC
ACCTTCGGCC TGTTTCTGGT CGGCTGGATC GTCGACCTGT TTCTGATCCC CGCCATGGAC
CGGCAGGCCG ACCTGCGGTT TGCATCCGGA AAAATCGACT ACAACATTGC CTGGCTGCTG
CTCACTTTTC TGGGCGTTTT CGGGGTGCAT CGCATGTACA TGGGAAAGTG GATCACCGGC
ATTATCTACC TGCTCACCGG GGGACTTTTT CTCATAGGCT ATCTTTACGA CTTCTGCACC
TTAAACAACC AGATCACCAT GATCAACCGG TCATCAACAG ACGTATAA
 
Protein sequence
MNNSNDTHMK TFGYILWLFG FTGSHRFYYG RPITGAIWFF TFGLFLVGWI VDLFLIPAMD 
RQADLRFASG KIDYNIAWLL LTFLGVFGVH RMYMGKWITG IIYLLTGGLF LIGYLYDFCT
LNNQITMINR SSTDV