Gene Dole_1992 details

Gene Information

• Locus tag: Dole_1992
• ID: 5694832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 2409639
• End bp: 2411384
• Gene Length: 1746 bp
• Protein Length: 581 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641264590
• Product: aminoglycoside phosphotransferase
• Protein accession: YP_001529873
• Protein GI: 158522003
• COG category: [J] Translation, ribosomal structure and biogenesis; [M] Cell wall/membrane/envelope biogenesis; [R] General function prediction only
• COG ID: [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.775829
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTGA TGGAAACATC CGGAGAGTGG CGCGCCCTGG TCCTGGCCGC CGGTTTTGGT 
AAGCGGCTGC TGCCTTATAC CCGGCTCACG CCCAAGCCCC TGTTTACCAT AGATAACCGT 
CCCCTGCTGG AGATCGTTCT GACCCGGCTG GCCGATGCCG GGTGCCGGGG CGCCATTGTC 
AACACCCACC ACCTGCACGA AAAAATCGAG TCCTTTCTTT GGCGTCAGGG CTACCCCATG 
CCGGTGCAGA CCCGTTACGA GCCTGAGATT CTTGGCACAG GGGGCGCCAT TGCCAACTGC 
GCCGATTTTC TGAACAGCGG CCCGTTTCTG GTGATCAACA GCGATATTTA TACGGATATC 
GACCCGGCCG ATGTGCTGCG ATTTCACCAT GGCCACGACG CCCCGGTCAC CCTGGTGCTG 
CACGACTTCC CGCGCTTTAA CCGGGTATGG GTGGATGAGA AGGATCGCAT CACCGGGTTT 
GGAGAAAACC GGAAGGCCGA GGCCGCGGGC ATTCGGCAGC TGGCCTTTAC CGGCATTCAT 
GTAATTGATC CGCGAATTTT TGAATTTCTT CCCCCGGCAG GCGCGTTTTC CAACATCATC 
GAGGTGTATG ACCGGATGAT TTCAGAGGGT GTCCCGCTTC AGGCCATGAC TGTTTCCGGC 
CACACCTGGC ACGATATCGG CACACCCGGG GACTACCGGC AGACGGCCTT TGAAAGAACA 
GTTGAAACCG CGCAGATCCG GGCCTTTGGC AAGGCGACGC CTGTCCGTTT GCAGGAAATT 
GCCCCGGACG GCTCCGATGC CCGGTGGGCC CGCCTTGTTT CAGATTCGGG CAGCCTGGTG 
GCCTGCGACC GGGGTATCAG GGCAGTGGAG GGCACCGGTG AAACTCAGGC GTATGAAGCC 
ATTGGCAGGC ATTTTTACGA TAAAGGCGTA CATGTTCCCA AAATACATAA TGCTGATCCA 
TTTGCGGGTC TGGTGGTTAT GGAAGATCTG GGCCCCACCT CTTTGCAGGA CCTTGTGCTC 
CGTGCCCATA CCGAAGAGAG CACAGTTGGC CTTTATCTGC CCGTGATCCG GAACCTGATC 
ACCCTGGCCG TCAAAGGCGC TCAGGGATTT GACCCGGCCT GGACCTGCCA GACGCCGGAA 
TATGACAAGA CCCTGGTCCT GGAAAAGGAG TGCCGCTATT TTACGCAGGC CTTTGTATCC 
GGCTACCTTG GGCTTGAAGG TTTTTATAAA AGACTTTATG ATGAATTTGA GATAGTTGTC 
GACAAAACAT TAACGTTTGG CTTTAAGTTA ATAATCCATA GGGACATGCA GTCCCGCAAC 
ATCATGATCA AAGATAAAAA TCCATTTTTC ATCGATTTTC AGGGCGCCCG GATCGGGCCG 
GTGCAGTATG ACCTGGCCTC CCTGCTCATC GACCCCTATG TGGCCCTGCC CCAACCGGTT 
CAGGAGCGAC TGGTCCATGA ATACATGGAC CGATTTGAAG AGTACCAAGC CTTTGATCCG 
GCCAATTTCC TGAAAGGATA CGCCTGTTGT AAAGTGACAC GTAACCTTCA GATGCTCGGT 
GCCTTTGGAT TTCTTACGCA AAAAGGGAAA AAACAGTTTG CCCGGTATAT TCCAACGGCT 
GCGGCCTCCC TGCCCGGCCA TGTGGAAGAG ATGGAGCAGG CCATTGATAA ACCTTTTCCC 
AAATTAAAGG CCCTGGCCCG GGATATTGCC GAACGGATAA GGGCAAACGG CCAAAACAGC 
TCGTAA 

 

Protein sequence

MTLMETSGEW RALVLAAGFG KRLLPYTRLT PKPLFTIDNR PLLEIVLTRL ADAGCRGAIV 
NTHHLHEKIE SFLWRQGYPM PVQTRYEPEI LGTGGAIANC ADFLNSGPFL VINSDIYTDI 
DPADVLRFHH GHDAPVTLVL HDFPRFNRVW VDEKDRITGF GENRKAEAAG IRQLAFTGIH 
VIDPRIFEFL PPAGAFSNII EVYDRMISEG VPLQAMTVSG HTWHDIGTPG DYRQTAFERT 
VETAQIRAFG KATPVRLQEI APDGSDARWA RLVSDSGSLV ACDRGIRAVE GTGETQAYEA 
IGRHFYDKGV HVPKIHNADP FAGLVVMEDL GPTSLQDLVL RAHTEESTVG LYLPVIRNLI 
TLAVKGAQGF DPAWTCQTPE YDKTLVLEKE CRYFTQAFVS GYLGLEGFYK RLYDEFEIVV 
DKTLTFGFKL IIHRDMQSRN IMIKDKNPFF IDFQGARIGP VQYDLASLLI DPYVALPQPV 
QERLVHEYMD RFEEYQAFDP ANFLKGYACC KVTRNLQMLG AFGFLTQKGK KQFARYIPTA 
AASLPGHVEE MEQAIDKPFP KLKALARDIA ERIRANGQNS S