Gene Dole_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1920 
Symbol 
ID5694760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp2321203 
End bp2321844 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID641264518 
ProductTetR family transcriptional regulator 
Protein accessionYP_001529801 
Protein GI158521931 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGATA TCTGCCGGGA TATCTTTCAG GCCCACCAGG ACACCATCAA GGTGAAAAAG 
GAGGCCGTGG GGATCAAAAA CCTGATCAAT ATTTATAATG CCACCCTGAA GCTGAGCAAC 
ACCAAGGGGT TTCACGCCAT GACCCTGCGG GACCTGGCAA AAGAGACCGG CCTGAGCCTG 
GGCGCCCTGT ACTCCTATTT TTCCAGTAAA GAACAGCTGC TGGGCATCAT TCAGGAACAG 
GGCTACCAGC TCACCAGCCG GATTCTGACC GGCGCGCTGG AAGGGGTGAC CACGCCTGAA 
AAGCGGCTTT CCACCGCCAT TCGTACGCAT CTCTATCTCA GCGAAACCAT GCAGCCGTGG 
TTCTATTTTT TTTACATGGA GGCCAAGCAC CTGGGCAAAG AAGACCAGAA AAAAGCCATT 
ACCAGTGAAC TCTATACCGA GCAGCTCTAC ACCGGTATTC TGGAGCAGGG GGTTAAAACC 
GGCGCGTTTC GCAGCCACAA CACCCTGTTG ACAGCCTCGG TGATCAAGGC CATGCTTCAG 
GACTGGTACC TGAAACGATG GAAATACTCC CGCCGCAAGG TGGGGGTGGA TGTCTATGCC 
GATTTTGTGT GTGATATGGT GAATACCTAT GTCCGGCCCT AA
 
Protein sequence
MEDICRDIFQ AHQDTIKVKK EAVGIKNLIN IYNATLKLSN TKGFHAMTLR DLAKETGLSL 
GALYSYFSSK EQLLGIIQEQ GYQLTSRILT GALEGVTTPE KRLSTAIRTH LYLSETMQPW 
FYFFYMEAKH LGKEDQKKAI TSELYTEQLY TGILEQGVKT GAFRSHNTLL TASVIKAMLQ 
DWYLKRWKYS RRKVGVDVYA DFVCDMVNTY VRP