Gene Dole_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1872 
Symbol 
ID5694712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2266280 
End bp2267113 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content47% 
IMG OID641264470 
Producthypothetical protein 
Protein accessionYP_001529753 
Protein GI158521883 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGACA TCCGGGTAGC TGCTTACTGC CTTATGCCGA ACCATTACCA CATGCTTGTC 
CAGACCCCTG AGGCAAACAT TTCAAGGAGC ATGCGGCATA TAAACGGCGT CTATACTCAG
AGATACAACA GTCGTCACCA TTGCGACGGC CAGCTTTTTC GGGGGCGTTA TAAATCCATC
CTTATCGATA CGGACAGTTA CCTGTTGCAG GCCGTTCGAT ATATTCATAG AAACCCTATA
CGCGCCGGAT TGACGGACAC GCTTGATACT TACAAATGGA GCAGCCACAA GGGGTATCTT
TCCATCGCCC CAAAATGGGA CTGGCTGTAC AAGACGCCTG TTCTGGCCAT GCTTTCGCAA
AATAGAAAAA ACTGGCTGAG GTACTATAAA AACTGGGTGT CGGTTGAGGA GACAGACGAG
GTCAGCGAAG CAATAAATGG GAAAAAATGG CCGGTTTGCT TAGGCCCGCA AGCGTTTATC
GATACGATCA AGGAGAGGTA TGGAAAAGAA AAAATAAACA GGGAGGTGCC TTCCAGCCGC
GAATTATTGC CGGATAGGGA TCGTATTTTG GAAGAAGTTT GCAAGGCATA CGATACGACG
GCGTCGGAGA TACTGCGGAT GCGGCGGGGA AAAAGAAATA ATGCCCGCAA TGTGGCCATA
TATCTTACCA GAAAGTTGAG GCGTGACACA TTGAAAGATA TCGGAAAACA ATTTCATATC
GACAATGACA GTACGGTAAG CAGCATCATG GAGCGGATGA AAAAAAAGAG GGCAGAGGAT
CGTAATTTTT CCAGCCGGGT AGATAGAATA GCGGAATTGA TCAAAAAGAG CTAA
 
Protein sequence
MWDIRVAAYC LMPNHYHMLV QTPEANISRS MRHINGVYTQ RYNSRHHCDG QLFRGRYKSI 
LIDTDSYLLQ AVRYIHRNPI RAGLTDTLDT YKWSSHKGYL SIAPKWDWLY KTPVLAMLSQ
NRKNWLRYYK NWVSVEETDE VSEAINGKKW PVCLGPQAFI DTIKERYGKE KINREVPSSR
ELLPDRDRIL EEVCKAYDTT ASEILRMRRG KRNNARNVAI YLTRKLRRDT LKDIGKQFHI
DNDSTVSSIM ERMKKKRAED RNFSSRVDRI AELIKKS