| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1866 |
|---|
| Symbol | |
|---|
| ID | 5694706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2258270 |
|---|
| End bp | 2259202 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264464 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001529747 |
|---|
| Protein GI | 158521877 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGA AAATCCTGGT GGCGGTGGAC CCGTCGGTCT GTTCCCGGTA TGCCATGCAG
TATGCGGCCC GGCTGGCGGA AGAGATTCGC GAGGTCGATT TCGTGCTGTT TCATGTGCAG
CCCACGGTTT CGTCCTACCT GGTGGATGAG GCCATGAAAC GGCCCCAGGC AAGGGCCGAA
CTGGACAAGC TGGTCCGGAA GAACCGTGAA GCGGCCCTGG CCCTGCTGGA AGCGTGCAGA
CAATACATAA TCGATGCCGG TGTGCCTGTG GGGGCGGTTG AGGTGAAAAC CATGCCCCGG
ATTTCCGGTA TTGCGGAAGA CATTGTCAAT ACGGCCCAGG AAGGGTCTTA TGACGCCGTT
CTGGTGGGCC GCCGGGGCAT CGGCGGCCTT CAGGAGATGT TTCTGGGCAG CGTCACCGCC
GGCCTGCTGG CCGGCTCCCG GGTGATTCCC GTGTGGATAG TGGACGGACC GGTTGAATCG
CAAAACATGG CCGTTGCCAT TGACGGCTCC ACCCAGTCCC TGCGGGTGGT GGACCACGTG
GCCCATATTT TTTCCGATGC GCCGGACGCG CGACTGACCT TTTTAAACGT GGAGCCCCGG
CTGGGCGATT TTACCGAAAT CGATCCCTCT CTGCTGGAGG CCGCTGAACT GGAAGCGGCG
GTGCTTACGG CAAACCAGCA GTATGTGGCC GGGTTCATGG AAAAGGCCGC CGCCATGCTG
GCAAAGGCCG GTATTGAAAA AGACCGGGTG ACGTTCAAAA CCGTCCAGTC CCGGTTTTTC
GCCGGCCGGG CCATTCTGGA TGAGTTGAAG AAAGACGGTT TCGGTACCGT GGCGGTGGGC
AAGACCGGCA CGGGAAACAG CCGCACCCTG GGCAAGGTGG CCGGCCATAT CACGCAGAAA
CTTTCCAATG CCGCGGTTTG GGTTGTTCCT TAA
|
|---|
| Protein sequence | MRKKILVAVD PSVCSRYAMQ YAARLAEEIR EVDFVLFHVQ PTVSSYLVDE AMKRPQARAE
LDKLVRKNRE AALALLEACR QYIIDAGVPV GAVEVKTMPR ISGIAEDIVN TAQEGSYDAV
LVGRRGIGGL QEMFLGSVTA GLLAGSRVIP VWIVDGPVES QNMAVAIDGS TQSLRVVDHV
AHIFSDAPDA RLTFLNVEPR LGDFTEIDPS LLEAAELEAA VLTANQQYVA GFMEKAAAML
AKAGIEKDRV TFKTVQSRFF AGRAILDELK KDGFGTVAVG KTGTGNSRTL GKVAGHITQK
LSNAAVWVVP
|
|---|
| |