| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1849 |
|---|
| Symbol | |
|---|
| ID | 5694689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2235341 |
|---|
| End bp | 2236981 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641264447 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_001529730 |
|---|
| Protein GI | 158521860 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGT CCCGCCTGAC CGATCTTGAT CTCTGGAAAC AGCTGAAGGC CCACGCTGAA
AAAATGGCGC TTCCGGAAAA CCATTTAAAA CACCTGACCA TGGCGCCGGA GCGACTTGCC
GAGTTTTCCA TTCAGGCCCT GGATATGGTG TACGACTTTT CCCGCCAGCG GGTGGACCGG
CAGGCCATTG ACCTGCTGAT GGAGCTGGCG TGGGAGCGCA AAGTAACCCA GCGGTTTCAG
GCGATGACAA CCGGCGCCGT TGTAAACACC ACGGAAAACC GGGCCGCCCT GCATACCGCC
TGCCGGGATT TTTCAAAAGC CAAGCGCGTT GTAAACAAAA TCGATGTAAC AGCGGAGATG
GCCCGGGTCC GTAAAGAAAT CAGGGAGTTC AGCGAAGCGG TCCATGCGGG CCAAATAACC
GGCGCCACAG GTAAACCCTT TGCCCATGTG GTGGTGGTGG GCATCGGCGG CTCTTACCTG
GGCACCGAAT TCGTGGCCCG TGCCCTGGCC GCCTATGCCG ACAAAGGCAT TTGCCTTCAC
TTTCTGGCCA ACGTGGACAT TCACAACTTC GGCGAAATCG CGGAAGCCAT TGATCCGGAA
ACAACGCTGT GGGTCATTGT TTCCAAAAGC TTTACCACCG CCGAAACCAT GGCCAACGCC
AACCAGGCCG CTGCCTTTAT GAAGGAGCAG GGGCTGGACC CGGCCCGCCA TTTTGTGTCG
GTTACCAGCA AGGGCAGCCC CGGAGACCAG ACGGGCCAGG ACGCGCCCTT TCCGGTGCTT
CGGTCGTTCC ACATGTTTGA TTTTATCGGG GGCCGGTACA GCGTCACCTC TGCCGTGGGC
GGGGTGCCCC TGAGCCTCTA CCTGGGATAT GACCGGTTCG AGACGTTTTT AAAGGGGGCC
CACCAGATGG ACGTTCACGC GGCCACGGCC CCACCCACCA CCAACATGCC GCTGACAGCG
GCCCTGCTGG GCATCTGGAA CAATAATTTT CTGGAATACC CGGCCCAGGC CATTATTCCT
TATGCCTCTC CCCTGGCCAG GCTGGCGCCC CATGTGCAGC AGCTTTACAT GGAAAGCAAC
GGCAAGTCGG TGACAGCCGA AGGAAAGCCC CTGGGTGTCC GGTCCGGGGT CATCATCTTC
GGCGAGCCGG GCACCAATGC CCAGCACTCC TTTTTCCAGC TGGCCCACCA GGGCGCGCCC
TTCCCCATTG ACTTTATCGG CGTGATAAAG CCTCAGTATG ATGCGTTCCA GGCTCTGTCC
AGGGGGGTGA CCAACCACCA GGAGTTGTGG GCCAACCTGA TCTCCCAGCC CCGGGCCCTT
GCCGAGGGGA AGGAGAGCGA AGACGGGCAC CGGTCTTTTT CCGGCAACCG CCCCTCTTCC
ACCATCCTTC TGGAAGACCT GTCCCCGGCG TCAGTGGGCA AGCTACTGGC CTTTTACGAG
GCCCGCACGG TTTACGAGGC CTTTGTCTGG GGCATCAATC CCTTTGATCA GTATGGTGTG
GAACTGGGGA AAAAGCTGGC GTCGGAGATA AGAAGCCAGA TGGCCGCAAA AAACAGGGAT
GCCGGCCACA CCTTTGAGAA TGTGGACTCC ATATCAAGGT TCTACCTTGA AAAGCTGATG
GGGAAAGGGA ATGATGAATG A
|
|---|
| Protein sequence | MRTSRLTDLD LWKQLKAHAE KMALPENHLK HLTMAPERLA EFSIQALDMV YDFSRQRVDR
QAIDLLMELA WERKVTQRFQ AMTTGAVVNT TENRAALHTA CRDFSKAKRV VNKIDVTAEM
ARVRKEIREF SEAVHAGQIT GATGKPFAHV VVVGIGGSYL GTEFVARALA AYADKGICLH
FLANVDIHNF GEIAEAIDPE TTLWVIVSKS FTTAETMANA NQAAAFMKEQ GLDPARHFVS
VTSKGSPGDQ TGQDAPFPVL RSFHMFDFIG GRYSVTSAVG GVPLSLYLGY DRFETFLKGA
HQMDVHAATA PPTTNMPLTA ALLGIWNNNF LEYPAQAIIP YASPLARLAP HVQQLYMESN
GKSVTAEGKP LGVRSGVIIF GEPGTNAQHS FFQLAHQGAP FPIDFIGVIK PQYDAFQALS
RGVTNHQELW ANLISQPRAL AEGKESEDGH RSFSGNRPSS TILLEDLSPA SVGKLLAFYE
ARTVYEAFVW GINPFDQYGV ELGKKLASEI RSQMAAKNRD AGHTFENVDS ISRFYLEKLM
GKGNDE
|
|---|
| |