Gene Dole_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1843 
Symbol 
ID5694683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2230268 
End bp2231626 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content54% 
IMG OID641264441 
Producthypothetical protein 
Protein accessionYP_001529724 
Protein GI158521854 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAT TTGCGTCAGA AGAGCTCGAT AGGTGGTTGA AAGGCCCTGA CCGGAAGCCG 
CTGGTGATGA GGGGCGCCCG TCAGGTCGGC AAGACCTGGC TTGTGCGTGA TTTTGCAAAG
CAACAAGGGC TGCAATTGAT TGAACTGAAC CTTGAAAAAT ATCCCGATTA TGCCGGTCTC
TTTTCAGGCA ACAGCCCCCG GGAAATCCTG AAAAACATTG AAGCCCAACT GGCTTTTAAA
ATCCTCCCCG AATCCGCGTG CCTTTTTCTG GACGAGATCC AGGCCGCTCC CGAGCTTTTC
GCAAAACTCA GGTGGTTCAG GGAAGACATG CCGGAACTGC CGGTGATCGC AGCCGGATCA
TTGCTCGAAT TCGTCTTGAA GAAAGCCGAT TTCAGCATGC CGGTAGGACG GGTCACTTAT
TTTTATGTCG AGCCCCTGTC GTTTTTCGAG TTCGTTCTGG CCTTGGGCAA TGAGCCTCTG
TATCAAAAAA TGCTTTCCAC CTCCCCGCAG GCACCGCTGC CTCAACCCCT GCATGCGCGA
TGCATGGAGC TGTATCGGCA ATATTGTCTT GTCGGGGGGA TGCCCGAGGC GGTCCGGACA
TGGCTTGACG GCAGGGACAT GCAGTCCTGC ATCAAAATCC AGCACGACCT TCTGTCCACC
TACCGGGATG ATTTTCACAA GTACGGCGGT GAAATCGATG CCAGGCTTCT ACACAAAATT
CTGCTCTCGG TTGCCGGACA GCTCGGGAAT AAATTCGTTT ACAGCAGGGT CGATCCCGAT
GTGAAAGCCC CTCTTGTAAA AAAGTTGCTG ATGTTTCTTT CCCAGGCAAA GGTATGTTCC
ATGGTTGTTC ATACCAGCGG CAACGGCCTT CCCCTGGGCG CGGAATCGAA CGATAAGTTT
TTCAAGGCAC TGATGGTGGA TGTCGGCCTG GTTTCCGCCC ATCTGGGCCT TGCTTCGGTG
AAGTCCGCCG ATTTGGACAA CATGCTTCTA TCAAACAGGG GCGGGCTCGC CGAGCAATTT
GTCGGGCAGC AGCTGCGTGC CGCCCAAACC CCGGCAATGG ACCCGCGGCT GTTTTATTGG
CAGAGAACCG GCGGCCGCCA GGGGGAAATC GATTATATCC TCCAGCATGG GGCCGATATC
GTTCCTGTTG AGGTCAAATC CGGAGCTGCC GGAAGCATGA AGTCCCTGCA CCAGTTCATG
GCGGAAAAAA GCCTGAAGAT GGCGGTTCGC CTGGATGCCA ACCCACCGTC TGTCAAAGAG
ATGAGCGTCA AGACAACCCA GGGCCGGTTG GTAAAGTACC GGCTCCTTTC CCTGCCGCTT
TATCTGGCAG GTAATATCAA TGTTCTGCTT GAAAGATAA
 
Protein sequence
MIRFASEELD RWLKGPDRKP LVMRGARQVG KTWLVRDFAK QQGLQLIELN LEKYPDYAGL 
FSGNSPREIL KNIEAQLAFK ILPESACLFL DEIQAAPELF AKLRWFREDM PELPVIAAGS
LLEFVLKKAD FSMPVGRVTY FYVEPLSFFE FVLALGNEPL YQKMLSTSPQ APLPQPLHAR
CMELYRQYCL VGGMPEAVRT WLDGRDMQSC IKIQHDLLST YRDDFHKYGG EIDARLLHKI
LLSVAGQLGN KFVYSRVDPD VKAPLVKKLL MFLSQAKVCS MVVHTSGNGL PLGAESNDKF
FKALMVDVGL VSAHLGLASV KSADLDNMLL SNRGGLAEQF VGQQLRAAQT PAMDPRLFYW
QRTGGRQGEI DYILQHGADI VPVEVKSGAA GSMKSLHQFM AEKSLKMAVR LDANPPSVKE
MSVKTTQGRL VKYRLLSLPL YLAGNINVLL ER