Gene Dole_1789 details

Gene Information

• Locus tag: Dole_1789
• ID: 5694629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 2161724
• End bp: 2165095
• Gene Length: 3372 bp
• Protein Length: 1123 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641264387
• Product: hypothetical protein
• Protein accession: YP_001529670
• Protein GI: 158521800

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGCTGA AAAAAATACT CTTTATGCTG GCATTGTCTG GCCTGATGGC AATAACTGCT 
CATGCAAACA CACCAGGCGA TACGGTTCCC GGCCTGGTTA ACATTGTCTG GGACGGCTCC 
GGCAGCATGG TCTGGACAAT TGCTACTGAC GAAACTTTTT ATTGGATCGA CTCAGAACCG 
TATGCGTATG TTTTTCCGGA AACCGAATAC TATTATGATG GTTCAAGCTA TGGCCGGCCT 
TTGCCTGCCG ACAACCGAAA CCACTGGCAA CCCCAGTGTT CTTTCTTTAA TTACATGTAT 
TACAATCCCG AAGTAAACTA CACACCCTGG CCCAGATGGA CCACACTGGA GGGTCATGCC 
GGAGAATTTG AAAATTTCCA GGCTGATATA AACACACCAC TTCAACATCC CATCGACATT 
TCACAAGGTG TCTTTGACCT GAACGACAAT TTTTTTTCCT GGGATTTAGT ACTGCCGGAC 
GGCTTGGAAC CGGAAGACGT GGAGGTTGTT GTCGATAATT CAGACATTCC CTCCATTACA 
GTGGATGACA TGGATGCAGG TTTTTTATCA GACCCGGCTA TCGGTTCCTG GATACGATAT 
GAAAATCCGG ATTATATAGG AAATGATTAC TATACCATAC GATATAGTGG AAAACCGACA 
ACTGCGACCT GGCAGACGGA TATAACAAAC AGCGGTGAAT ATGAGGTCCT GATTAGTGTC 
CCCTTTGGAA TAAACCGGAC TCGAGAAGCC AATTACACTG TTTTTCACGA CAACGGTTCA 
AATGAGCAAG CAATCAGCCA GCGGGCCGAT ACCCATCAGG AGTGGATATC CTTGGGTAGT 
TATAATTTTA CTGATACAGC AAAAATTATG GTAATAAGCA GTCAAGCTTT CACTCACCTG 
GCTGTAGATG CTGTCATGCT TGTTCCAAAA TTTGACACAT CCGCCAACTT GCCTGTCGCT 
TTTTCCTCAA CCGGGCCATG GCAGACAGTC AGCAGCAGCC AGGCCTACCC TGACGCAACT 
GGAAATAGCC ACTGTCTTGT TACCGCGGAG ACCGGCACCC CCTGTTCCGC CACATGGCAG 
GCCAACAACC TGGATCCTTC CATAACCTAT GATGTCTATG CCCGTTGGGT GGAAGGCAGC 
GACCGCTCAA CCGCTGTTGA ATACAATATT GATCATATAG ACGGCAGCCA GGCTGTAACA 
GTAAACCAGC GCCTCAATGG CGGCGCATGG TGCCTCCTGG CTTCCGGCCT GGGCTTTGGC 
TGCACCGGTA CAGTCACCTT GTCCCATACC CCCACGGATT TGGCATCAGA CAGTGCCTGC 
GCCGACGCAG TCTTATTTGT TAAATCCGGG CTGCGGTTGA CAGGAGATAC AATCTTTGCC 
CATTATTTTA TTCAAAAATC CCCCGACGAT GTCTTTCTGA TCGATCTTAA CGGCGGGATC 
GCCTACTTCA GGGCACTGCT CGCGCCAGAT GGCAAAACCG TCGAGGCACT GACCCAGATT 
ACGGAAGAAG AAGCCGGCGC GGAAGGGCTT GTCACCGGCC GCACCTACCT GGAGGAACGA 
CAAAATTTTG CCAACTGGTA TCAATTTTAC CGCAGGCGTT ATTTCACCGG TATCGCGACC 
CTTGGACAGA TGATAAATGA CTGGTCTAAT GTTTTTCTGC GTATCACCTC GTTTCCGCCT 
GATAATTTTT TCAGAAGAAT CTCTCCTGTT GATGTAACGA TCCGCAATAC CGATGGGGAA 
CTGACCCACT ACAACGAAAA AGACGACATC CTTTATGATT TATACACAAT GATGCACCCC 
TGGGGCGGGA CCTTTCTGCG CGAAGGGCTG TACCAGGCCG GCCAGTTTTT CGAACTGGGC 
CGAAGTGACT TCTGGCCTGA GGACAGATGG GAGAACCTGC CGCCCGGGGC GTTCCAGGTA 
TATTCCAGCC CGGATTACTA CCCGTTTTTT ACCCCGGAAA ACGGTGGTGC GTATCAGCAG 
GCATTCACCG TTGTAATGAC CGACGGCCTG TGGAACGGCA CATTGAGATA TCCGGTGGGC 
AATGTCGACG GGGGTTGGAT GTACAACCCG CCTTTCACCG GCGGCGTTTT CGGTGACGAC 
TACTCTGACA CTGCCGCGGA TGTAGCCATG TACTTTTATT GTCGGGACCT GCGCCCGATT 
CTAAATGATA TTGTGCCGCC AGGTGACTTT GATTTCGCCC CCCATCAACA CATGGTGACA 
TACGCTGTTG CACTAGGCGT TCGTGGGGCA CACTTCAGCG AAGCGTATCG TCAGATGACC 
GAACCCTATC TGAGATATGG CGCGGAGCCC CCATCCTGGA TCGGCTGGCC TCAGATCGTG 
CCTGATACAA ACAGCACTAT TGATGATCTC TGGCATGCTA CCATAAATGG CCGGGGGTCG 
TTTTTTTCAG CCATGGATGT AAATAATTTG GCTGCTGCCA TGGCCGCAAT ACGGCAGGAT 
ATCACGCAGC GACTGGAAAT TCCTTCCACC CCCGCCAATC TGATCAACTG GAACGGCAAC 
CTGGTGGCCG ACTTCGGCGA CAACGGCCTG TGGTACCACA ACGGCAGCAA CTGGAACTGG 
ATGACCAACC GGGGCCATGT CAACCAGATG GTAGTGTGGG ACGGCAAACT GGTTGTGGAT 
TTCGGGGCTG ACCACGGCAT GCACTACTAT GATGGTTCGT GGCACTGGAT GACCAACAAG 
GATGGTGTGG CCATGATGAC CGTTTGGGGC AACAAGCTGG TTGTCGATTT CGGCAACGGT 
CGGAGTGTCT ACAACTATGA CGGTGCATGG CACTGGATGT CCAACAAGGA TGACGTGGCC 
GACATGACCG TTTGGAACAA CAAACTGGTT GTTGATTTCG GCGGCGGTCG GAGTGTCTAC 
AACTATGACG GTGCATGGCA CTGGATGTCC AACAAGGATG ACGTGGCCGA CATGACCGTT 
TGGAACAACA AACTGGTTGT TGATTTCGGC GGCGGTCGTG GAATGTTCAA CAACGACGGC 
ACCTGGCACT GGATGACCAA CAAGGATGAT GTGGCCATGA TGACCGTTTG GGGCAACAAG 
CTGGTTGTCG ATTTTGGCAA CGGTCGAAGC GTCTACAACT ACGACGGCTC ATGGCACTGG 
ATGACCAACA AAGATGACGT GGCGAAAATG GTGACCTGGA AGGACGGTGC CGACAAACTG 
GCCGTAGACT TCGGCTCAGG CCGGGGGATG TTCTATTATG ACGGTGTATG GCACTGGATG 
TCCAACAAGG ACGATATTAC GGATATGATC GCCTGGGGCA CCTGCCTGGC CGTGGATTTT 
GGCTCAGGCC GGGGGATGTA CAACTACGAC GGTGCCTGGC ACTGGATGAA AAACTGGAGC 
ACGGCGGATT AA 

 

Protein sequence

MRLKKILFML ALSGLMAITA HANTPGDTVP GLVNIVWDGS GSMVWTIATD ETFYWIDSEP 
YAYVFPETEY YYDGSSYGRP LPADNRNHWQ PQCSFFNYMY YNPEVNYTPW PRWTTLEGHA 
GEFENFQADI NTPLQHPIDI SQGVFDLNDN FFSWDLVLPD GLEPEDVEVV VDNSDIPSIT 
VDDMDAGFLS DPAIGSWIRY ENPDYIGNDY YTIRYSGKPT TATWQTDITN SGEYEVLISV 
PFGINRTREA NYTVFHDNGS NEQAISQRAD THQEWISLGS YNFTDTAKIM VISSQAFTHL 
AVDAVMLVPK FDTSANLPVA FSSTGPWQTV SSSQAYPDAT GNSHCLVTAE TGTPCSATWQ 
ANNLDPSITY DVYARWVEGS DRSTAVEYNI DHIDGSQAVT VNQRLNGGAW CLLASGLGFG 
CTGTVTLSHT PTDLASDSAC ADAVLFVKSG LRLTGDTIFA HYFIQKSPDD VFLIDLNGGI 
AYFRALLAPD GKTVEALTQI TEEEAGAEGL VTGRTYLEER QNFANWYQFY RRRYFTGIAT 
LGQMINDWSN VFLRITSFPP DNFFRRISPV DVTIRNTDGE LTHYNEKDDI LYDLYTMMHP 
WGGTFLREGL YQAGQFFELG RSDFWPEDRW ENLPPGAFQV YSSPDYYPFF TPENGGAYQQ 
AFTVVMTDGL WNGTLRYPVG NVDGGWMYNP PFTGGVFGDD YSDTAADVAM YFYCRDLRPI 
LNDIVPPGDF DFAPHQHMVT YAVALGVRGA HFSEAYRQMT EPYLRYGAEP PSWIGWPQIV 
PDTNSTIDDL WHATINGRGS FFSAMDVNNL AAAMAAIRQD ITQRLEIPST PANLINWNGN 
LVADFGDNGL WYHNGSNWNW MTNRGHVNQM VVWDGKLVVD FGADHGMHYY DGSWHWMTNK 
DGVAMMTVWG NKLVVDFGNG RSVYNYDGAW HWMSNKDDVA DMTVWNNKLV VDFGGGRSVY 
NYDGAWHWMS NKDDVADMTV WNNKLVVDFG GGRGMFNNDG TWHWMTNKDD VAMMTVWGNK 
LVVDFGNGRS VYNYDGSWHW MTNKDDVAKM VTWKDGADKL AVDFGSGRGM FYYDGVWHWM 
SNKDDITDMI AWGTCLAVDF GSGRGMYNYD GAWHWMKNWS TAD