| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1788 |
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| Symbol | |
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| ID | 5694628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2158421 |
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| End bp | 2161699 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641264386 |
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| Product | polymorphic membrane protein |
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| Protein accession | YP_001529669 |
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| Protein GI | 158521799 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC TTAAATGGAA AGCAGCACCC TTCTTTTTTG GTCTAAGTGT TTTTGCATTG
CTGTGCCTGT CACCGTTATC CGCATTTTCT CAAAACATCA ACATTGATCC GTGTGTTGCC
ATACTGGGCC TTGATGGTGG CGAGTGCGGT GGATGGGCGA TGGATAACAG CTTTGACTGT
ATGTATGAAG AAAATTCTAT TCTCCGTGTC ATCAAATATC TGGATAACAA ATCATTTCAA
TATCGAAGCG TTTTGGAGTT CAACTTGCCG ACGGAGGTAA TGGATTCAAC GATCAGCTCT
GCTACCCTCT TTTTGCCGAA CGACAGTTCC TACGGCTACC TGTACGATCG GGTGATTTTA
AATGGATATA ACGCGGACTG CACCGCCCGG CTTGATGATT TTGAGAATAC AGATAATGCT
ATTGAATATT TTCCTGCCCA TACCAGTGGG ACGGACTATT ATATAGATGT AACTGAATTT
ATAAGCACAA TGCAGGGAAC TACGGGAACG ATAGGGTTTA ACCTGATTTC AAACGGTTCG
GATGGGTATT TAGATGTACG AATTGCCAAT ACTGCTGAAA GGCGTTCCCA GCTCCGGGTG
CAATATGCGG CAAAAATTGT TGTGGATTCG GATGCAACTG GCAACAATGA TGGCACATCA
TGGACAGACG CCTATGTCTC TCTGCAGGAC GCCCTCAACG CCGCCATGGC CGGCGACCAG
ATCTGGGTGG CGGCCGGCAC CTATTACCCG GATGAGGGCA GCAGCCAGAC AGACAACGAC
CGCGCGTCAA CATTTTTAAT CCCCAGCGGT GTGGCTGTTT ATGGGGGCTT CGACGGCACG
GACGGTGCCG GCGGCGGCGC CCTGGAAACC ACCCTTGACG AACGGGACTG GGAAAACAAT
CCAACCATTC TAAGCGGAGA CCTGGGCCAG GATGACGATT CAGGCGGCGA CAACAGCGAA
AATGCCTACC ATGTGGTCTG GTTTGACCGG GCCGGCAACC AGACCCGCCT GGATGGCGTT
ACCATAACCG CCGGCAACGC CGATGGGAGC CTCTGGAACG ACAAGAACGG AGGCGGAATT
TACAATGACG GTTCCGGCAG CGGAAACAGC AGCAATCCCT GCTTAAACAA CTGCACCATC
AGCGGGAACA ATGCTTTTAA TGCCGGCGGC GGTATATATA ATAACGGGTC TGACACCCTC
AGCCTTACCG GGGACAGCAG CCCCACCCTG ACCGACTGTG TCATCAGCGG GAATAATGCC
GGTTCCGGCG GCGGCATATA TAATTACGGC AGTTATGGCA ACAGCAGCCC GGTATTGACC
AACTGCACGA TCAACGAAAA CAACGCGTAC AACGGCGGTG GCATCTACAA CAACAGCAGC
AACGGCAACA GCAGCCCCAT CCTTTTGAAC TGTATCATCA ACGGTAATAC CGCTGAAATG
GGGGGCGGGC TCCATAACGA AAGTGACGAT ACCGGAACCT GCATGCCTGA GCTGACCGGT
TGTACCATCA CCAACAACAC CGCTCTCTAT GAAGGCGGTG GAATGGATAA CTATGCACAC
AATGGAACCA CAAGCCCGAT TCTCACCGAC TGCACCATCA GTGACAATTC TGCCGATACC
GGCGGCGGAT TCTCCAATAA CGCTTTAGAG CATGGAATAT GCAGCCCCAC CCTGTATAAC
TGCGTCATCA GCGGCAATGC CGCTACGGGT TTTGGGGGCG GAATGTATAA TTATAACAAC
AGCGGAGAGA CCTGCCCTGC CCTGACAAAC TGCACCATCA CCAACAACAC CGCAACCTAT
GAAGGCGGTG GCATCGGTAA TTATGCGCAT AATAATGGGG CATCAAGCAG CCCTGCGCTG
ACCAACTGTG TTATCCGTGG CAACACGGCT GAAGTGGGTG GTGGCATCAG TAACTACGCG
GATAATGAGG GCACATCAAG CCCTGTCCTT ACCAACTGCA CCATCAGTGG CAATGCCGCC
GACAACGGCG GCGGTATTTT CAATGGCGGG TTCGAAGGCA TAATCAGCCC GGCCTTAACC
AACTGCATCC TCTGGAACAA CCATGCGGAT ATATCCGGCC CTGAAATATA TAATGATGGT
GGTTCTCCCG CTTACGCCTA CTGCAACATC AAGGGCAGCG GCGGCAGCGC GGCCTGGAAC
ACCACCCTGG GCACGGACAG CGGCAACAAC ATAGACGCCG ATCCCATATT TGCAAACCCG
GCCGCCGACC TGCGCCTGAT GGCCGGTTCG CCCTGCCTGG ACACCGGCAA CAATGTTGCC
AACGGCACGT CGTTTGACCT GGATGGCGAA GCCCGTATCC AGAACACCAT CATTGACATG
GGGGCCTACG AAGGCGCGGA AGCCCTGCCC TTTGCCAACC TGGTCAACTG GAACGGCAAC
CTGGTGGCCG ACTTTGGCGA CAACGGCCTG TGGTACCACA ACGGCAGCAA CTGGAACTGG
ATGACCAACC GGGGCCATGT CAACCAGATG GTGGTGTGGG ATGGCAAGCT GGTGGTGGAT
TTTGGTTCCG ACTACGGAGT GCACTACTAT GACGGCACCG GCTGGACCTG GATGTCCAAC
AAAGGCGGTG TGGCAAAAAT GATCACCTGG AACAATGGCG CAACAGAAAA GCTGGTGGTG
GACTTTGGCG CAGGCAAGCG CGTCTACACA TATAACGGTT CCTGGAGCTG GTTTACCAAC
AAGGACGCCG TGGCAAACAT GACCGTGTGG GATAACCGGC TGGTGGTCGA CTTCGGGTCC
GGCCGGGGCG TGTACAACAA CAACGGCACC TGGAACTGGA TGACCAACAA GGACGACATT
GCCAAAATGG TGGCCTGGAA CAACGGTTCT GCCGAGCGGC TGGTGGTGGA CTTTGGCGGG
GGCCGCCGGG TGTACACCTA CAACGGCGCC TGGGCATGGC TCACCAACAA GGATGACGTG
GCCGACATGA CCGTGTGGAA CAACAAGCTG GTTGTCGATT TCGGTAACGG CCGGAGCGTG
TACAACTATG ATGGTGCATG GCACTGGATG ACCAACAAGG ATAACGTGAC CAAAATGGTG
ACCTGGAAGG ACGGTGCCGA CAAACTGGCC GTAGACTTCG GCTCAGGCCG GGGGATGTTC
TATTATGACG GTGTATGGCA CTGGATGTCC AACAAGGATG ATCTTACGGA TATGATCGCC
TGGGGCACCC GCCTGGCCGT GGATTTTGGC TCAGGCCGGG GGATGTACAA CTACGACGGT
GCCTGGCACT GGATGAAAAA CTGGAGTACG GCAGACTGA
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| Protein sequence | MTALKWKAAP FFFGLSVFAL LCLSPLSAFS QNINIDPCVA ILGLDGGECG GWAMDNSFDC
MYEENSILRV IKYLDNKSFQ YRSVLEFNLP TEVMDSTISS ATLFLPNDSS YGYLYDRVIL
NGYNADCTAR LDDFENTDNA IEYFPAHTSG TDYYIDVTEF ISTMQGTTGT IGFNLISNGS
DGYLDVRIAN TAERRSQLRV QYAAKIVVDS DATGNNDGTS WTDAYVSLQD ALNAAMAGDQ
IWVAAGTYYP DEGSSQTDND RASTFLIPSG VAVYGGFDGT DGAGGGALET TLDERDWENN
PTILSGDLGQ DDDSGGDNSE NAYHVVWFDR AGNQTRLDGV TITAGNADGS LWNDKNGGGI
YNDGSGSGNS SNPCLNNCTI SGNNAFNAGG GIYNNGSDTL SLTGDSSPTL TDCVISGNNA
GSGGGIYNYG SYGNSSPVLT NCTINENNAY NGGGIYNNSS NGNSSPILLN CIINGNTAEM
GGGLHNESDD TGTCMPELTG CTITNNTALY EGGGMDNYAH NGTTSPILTD CTISDNSADT
GGGFSNNALE HGICSPTLYN CVISGNAATG FGGGMYNYNN SGETCPALTN CTITNNTATY
EGGGIGNYAH NNGASSSPAL TNCVIRGNTA EVGGGISNYA DNEGTSSPVL TNCTISGNAA
DNGGGIFNGG FEGIISPALT NCILWNNHAD ISGPEIYNDG GSPAYAYCNI KGSGGSAAWN
TTLGTDSGNN IDADPIFANP AADLRLMAGS PCLDTGNNVA NGTSFDLDGE ARIQNTIIDM
GAYEGAEALP FANLVNWNGN LVADFGDNGL WYHNGSNWNW MTNRGHVNQM VVWDGKLVVD
FGSDYGVHYY DGTGWTWMSN KGGVAKMITW NNGATEKLVV DFGAGKRVYT YNGSWSWFTN
KDAVANMTVW DNRLVVDFGS GRGVYNNNGT WNWMTNKDDI AKMVAWNNGS AERLVVDFGG
GRRVYTYNGA WAWLTNKDDV ADMTVWNNKL VVDFGNGRSV YNYDGAWHWM TNKDNVTKMV
TWKDGADKLA VDFGSGRGMF YYDGVWHWMS NKDDLTDMIA WGTRLAVDFG SGRGMYNYDG
AWHWMKNWST AD
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