Gene Dole_1761 details

Gene Information

• Locus tag: Dole_1761
• ID: 5694600
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 2120165
• End bp: 2122069
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641264358
• Product: small GTP-binding protein
• Protein accession: YP_001529642
• Protein GI: 158521772
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGTT TTGTTATTTC AATAAACAAC AGAGACACAA CGGCGGCTGT AAAAATGAAG 
AAGACAAACA ATATTCCCAT CAGAAACATC GCTATCATCG CCCATGTAGA CCACGGCAAG 
ACAACACTGG TGGATGCCAT GTTCCGGCAG AGCGGCCTGT TCCGTGAGGG GCAGGCAGTG 
GATGAGCGGC TGATGGACAG CATGGACCTG GAGCGGGAGC GGGGCATTAC CATTGCCGCC 
AAAAACTGCG CCATCCACTG GAGAGACACC AAGATCAACA TCATTGACAC GCCGGGCCAC 
GCGGATTTCG GCGGAGAGGT GGAGCGGGCA CTCTCCATGG CCGACGGCGC CATTCTCCTG 
GTAGACGCCT CCGAAGGTCC CCTGCCCCAG ACCCGTTTTG TTCTGGACAA GGCCCTGAAA 
AGCGGGCTGG CGATTATCGT GGTCATCAAC AAAATCGACC GGGCCGATGC CCGTCCCGCT 
GAAGTGCTGG ACGAGATATA CAGCCTGCTC ATCGACCTTG GCGCAACAGA CCGGCAGATC 
GAGTGCCCCT GCCTCTATGC CGTGGGCCGG CAGGGTATTG CCATGAAGTC GCCGGTGGAC 
AAAGGAGAAA ACCTGCACCT GCTGCTGGAC ATGATGATAG ACGAAATTCC CGGGCCGTCG 
GCCGATCCGG AAGCCCCCTT TCAGATGCTG GTATCGGACC TGGGGTATTC GGATTACCTG 
GGCCGCCTGG CCGTGGGCCG GGTGGTCAAC GGGTCGGTGG AATCCAGAAA AAACCTGGTC 
TGCCTGAAGG AAGACGGAGA GCAGGCCCCT TTAAAAATTT CCAGGCTCCA GGTATACAGC 
GGCCCGGGCC TGAAGGATGC CCAGCGGGCC GATGCCGGCG ATATTGTCGT GTTGTCCGGC 
ATCGAAAATG TACACATCGG CGACACCATC TGCACCGATG AAACGCCCAT TGCCCTGCCC 
CGCATACGGG TTGATGAACC CACGGTCTTC ATGCGGTTTG CCGGCAACAC CTCTCCCCTG 
GCCGGCATGG AGGGCAAGCT GGTACAGGCC AGCCGGATTT ATGCCCGCCT GGTCAAGGAA 
ACCCTCATGA ACGTCTCTAT TCGGGTGGAG GCCGGTGACG ACAGGGAAAG CTTTATCGTC 
AAGGGCCGGG GGGAATTCCA GATGGCCATT CTTGTTGAGA CCATGCGGCG CGAAGGGTTT 
GAGCTCTGCG TGGGCCGGCC CCAGGTGATT TACCGGTATG AGAACGGCCG GCGACTGGAG 
CCGATTGAAG ACCTGCTGGT CAACTGTGAG GCCGCCTACA GCGGCATTGT GACGGAAAAA 
CTTCTGCAGC GGAAAGGGAC CCTGGTCCGC ATGGAACGCC AGGACAACGA CCGGACCCGC 
CTGGCTTTTT CAGTGCCCTC CCGGGCGTTG ATCGGGTTTC GGGACGAGTT TCTCACTGAT 
ACCCGGGGCA CGGGCATCAT GAACAGCGCC CTTGCGGGCT ACGAACCTTA CCGGGGCGAC 
TTTCCCGGGC GGTTTACCGG CAGCCTTGTA TCGGACCGCC AGGGAAAGGC CGTTGCCTTT 
GCCCTGTTCA ACCTGGAGGC CAGGGGGAAG CTGTTTACCC GGCCCGGCGA GGTGGTGTAT 
GAGGGCATGA TCATCGGGGA GCGCAACCGG GACACCGACC TGAATGTCAA CCCCTGCAAG 
ACCAAACAGC TTAGCAACAT GCGGGCCTCG GGCAAGGACG AGGCCGTCAC CTTGACCCCG 
GTGACGCCCA TGACCCTGGA AAAGGCCATT CAGTTTATCG GTGACGATGA AATGATTGAA 
GTGACCCCGA AAAGCATTCG GCTGAGAAAA ACCATTCTCT CGGCCCACGG ACGCAAGGTG 
TTTGAACGAC GGGGCGCTGT TGACCTATCT TCTGCCTGCG CGTAA 

 

Protein sequence

MTGFVISINN RDTTAAVKMK KTNNIPIRNI AIIAHVDHGK TTLVDAMFRQ SGLFREGQAV 
DERLMDSMDL ERERGITIAA KNCAIHWRDT KINIIDTPGH ADFGGEVERA LSMADGAILL 
VDASEGPLPQ TRFVLDKALK SGLAIIVVIN KIDRADARPA EVLDEIYSLL IDLGATDRQI 
ECPCLYAVGR QGIAMKSPVD KGENLHLLLD MMIDEIPGPS ADPEAPFQML VSDLGYSDYL 
GRLAVGRVVN GSVESRKNLV CLKEDGEQAP LKISRLQVYS GPGLKDAQRA DAGDIVVLSG 
IENVHIGDTI CTDETPIALP RIRVDEPTVF MRFAGNTSPL AGMEGKLVQA SRIYARLVKE 
TLMNVSIRVE AGDDRESFIV KGRGEFQMAI LVETMRREGF ELCVGRPQVI YRYENGRRLE 
PIEDLLVNCE AAYSGIVTEK LLQRKGTLVR MERQDNDRTR LAFSVPSRAL IGFRDEFLTD 
TRGTGIMNSA LAGYEPYRGD FPGRFTGSLV SDRQGKAVAF ALFNLEARGK LFTRPGEVVY 
EGMIIGERNR DTDLNVNPCK TKQLSNMRAS GKDEAVTLTP VTPMTLEKAI QFIGDDEMIE 
VTPKSIRLRK TILSAHGRKV FERRGAVDLS SACA