| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1704 |
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| Symbol | |
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| ID | 5694541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2040043 |
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| End bp | 2045310 |
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| Gene Length | 5268 bp |
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| Protein Length | 1755 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641264299 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001529585 |
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| Protein GI | 158521715 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.041755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAACT CTCTAATTAT GGAGGGGAGA CAAAAATTGA GATCAAAAAC CAACCGATGT
CTTTTCACAC CGATACTTTT TATTCTTACA ATATTCGGCA TTTTCCTGTC CGTTACAGCC
TTTGCCGCCA CAATTAATGT TCAGCCAGGT GGCTCCATTC AGGCGGCTAT TGACCAGGCC
GTGTCCGGCG ACACGGTGTT GGTGGCAGAC GGCACCTACA CCGGCACCGG AAACCTAAAC
ATCGACTTTA ACGGCAAGGC CATCACCGTT ATTTCAGAAA ACGGACCCAC CGCCTGCATC
ATCGACTGCC AGAGCAGCGG CAGAGGGTTT CTATTTGATT CCAATGAGAC ATCAGATTCC
TTACTCAGTG GATTTACAAT AACAAACGGC TCGGCAGACG ACGGTGGTGG TATCTCCTGC
GATTATGGTG CGTCTCCCAC TATTGAAAAC TGTATTATTC AGGACAACAG CGCGTCAGAT
GATGGCGGAG GTATCTGTTG CGAAAATGGG GCTGCCCCGG TTATAAAAAA TTGCGTCATT
CAAGACAACA CATCCGGCGA TGATGGGGCG GGTGTTTACG GCCAAGACAG TGGCACAAAC
CCTTCACTCA TAAATTGCAT TATTACCAAC AACCATGCCG ACTCATCGGG AGGCGGAACC
GGTTGTAAAG ATGGCAAAAT AACGGTCCTT AACTGTACCA TTGTCCGTAA CACCGCAAAT
AGCGCTGGGG CTCAAGTATT TTTATATAAC GCTCAGTCTG GAGTTGTATT TAAAAACGCC
ATCATCGGGA CCGGCTTCTA TAAGGCCAAC TGCACCCCGG CTGTGACATA CTGTAATATT
GATGGGGGCT ACACTGGAGA AGGCAATATC GATGCTGACC CCATGCTGAC CGCTGACTTC
CACCTTCAGG AAGGCTCCCC CTGTATTGAT GCCGGCACTT CAACCGGTGC CCCGGCAACC
GATATTGACG GCGATACCAG GCCAGCGGGC AGTGGGATCG ATATAGGGGC GGATGAACAC
CTTCTCATTG ATATCGACGA AGACGGCCTG TCAGATGCAT GGGAGATGAC ATGGTTCGGC
TCCCTTGAAT ATGGGCCAAA TGACGACCCG GATAATGACG GCCTGACAAA CCTTGAAGAA
TATAACCTGG GAACCAACCC GAACGCGACA CCTATTATTG TATCGCCCGG CGGTTCGATT
CAGGCGGCCA TTGATCAGGC GTCAAACGGA GACACCATCA TTGTTTCCGA CGGGACTTAC
ACCGGTACCG GCAACGTAAA CATAGACTTT AACGGCAAAG CCATTATCGT TCGATCAGAG
AATGGCCCGG CCGCCTGTAT TATCGATTGC CAAAGCAGTG GCCGGGGGTT CTATTTCCAT
TCAGGTGAAA CAGCAACTTC GGTTCTTTCG GGATTTACCA TTCAAAACGG CTCAGCAGGC
GATGGCGGCG GTATATCTTG TGACCAGGGG GCTTCACCGA CAATTAAACA TTGTATAGTC
AGAAACAACT CAGCCTCCGA TGATGGCGGT GGTATTGCCT GTGAAAACGG TTCTGCTCCG
ATAATATCTG GTTGTATTGT CAAAGAGAAT ACTTGTTCTG ACGATGGCGC CGGTATTTTT
TGCGACGATT CAGGCACACA TCCAATAGTT ACAAATTGTA TTATCACAGA TAACCAGTCC
CAGGGCAGCG GCGGTGGTAT CGGTTGTCAG GACGGCAGTA AAGCGACTGT CGTAAACTGC
ACCATCGTTG ATAACACTGC ATCAGCTTAT GGTGATCAAG TATTTCTGAT CCAATCCTCC
TCTGTGTTCA AGAATTCAAT TATCGGTAGT GACTTTTTCA AGTACAACTG CACACCGACT
GTCACCTATT GCAACATTGC CGGTGGTTAC AGTGGAGAAG GAAACATCAA CGCCGACCCC
ATGCTGACCG CTGACTTTCA CCTCCAGGAG GGTTCCCCCT GCATTGATGC CGGCACCCTG
ACGGACGCAC CGACAACCGA TATTGACGGG GATATCAGAC CGGAGGGCAG TGGGATCGAT
ATAGGGGCGG ATGAATACCT TTTCATTGAT ACCGACGAAG ATGGCCTGTC AGATGACTGG
GAAATCAGAT GGTTTGGTTC TCTTGAGTAT GGTCCGATTG ATGATCCGGA TAATGACGGC
CTGACAAACC TTGAAGAGTA TAATCAGGGA ACCCGACCGG TTTACATTAC CGTATCTCCT
GGTGATTCTA TACAGGCAGC CATTGATCAG GCATTAGACG GCGATACAAT CATTGTTGCA
GATGGCATAT ATTATGAGGG GGATATAGAC TTTAATGGCA AGGCTATTAA CGTTCGATCC
GATCATGGGC CCACAGCCTG TATTATCAAT TGTCAAGGTT ACGATAGAGG ATTTTATTTC
CATTCTGGTG AGACTTCGAC CTCTATTTTG GATGGTTTCA CAATAATGAA TGGCTCGACA
ACATACGGTG GCGGTATCTC ATGCGATCCG TCTTCCCCAA CCATTAAAAA CTGTATTATT
CAAAACAACA CCGCATCAAA ACACGGGGGA GGAGTCTTTT CCGGGGAGAA TGCCAACCCT
ACAATAATAA ACTGTATTAT TACTAACAAC GTATCGGTTT CCGGTGGTGG TATTGGATGC
AAAAAGGGTA CTATAACAGT TGTGAATTGC ACTGTTGTCA ACAATACAAC AGGTGACTAT
GGCTCACAAG TTTTCCTGCA TCAATCAGAT GTTCAACCTG TGTTTACAAA TACGATCATT
CGAGGCGAAT TTTACATAGA TAGATGCACT CCAATTGTTA CATATTGCAA TATCACCGGC
GGCTACACCG GAGACGGCAA CATCGACGCA GACCCTATGC TTAAGGCGGA TTTTCACCTG
CAAGAGGGAT CCCCCTGTAT TGATGCCGGC ACATTGCTCG ATGCCCCGGC AATCGATATT
GACAGAGATA CCAGGCCGGA CGGGAACGGT GTGGATATCG GAGCAGATGA ATACTGTTCT
GGTGAATCCT GCTTTGTCGA TAATGATGGA GATGGCCTGT CCGATACTTG GGAGATGACA
TGGTTTGGTT CTCTTGATTA TGGAGCAAGC GATGACCCGG ACAATGACGG CCTAACCAAC
CTCGAAGAGT ATGAACAGGG GACCCACCCG GCACCCATCA CCGTATCTCC CGGCGAATCT
ATTCAGGCCG CCATTGATCT GGCAATAAAC GGCGATGTGA TTGTTGTTGA GGATGGCACA
TATTATGAAT GGGGCATAGA CTTTAAAAAT AAAGCGATCA CTGTTCGATC CGCGAACGGT
CCCACCGCCT GTTTTATCGA CTGCCGGAGC AATGGGAGAG GGTTTTATTT CCATTCAGGC
GAGACCTCGG ACTCGGTTCT CTCCGGAGTT ACCATCAAAA GAGGGTCTGC CACTAATGGC
GGCGGCATAT CCTGCGTCGG CGCCTCTTCT CCCACAATTA AAAACTGTAT TATCCAAAAC
AACACCGCAT CCGACACCGG TGGCGGGATA TATTGTGCAG ATAGAGATAC CCGCCCTGCA
ATCATAAATT GTATTATTAC CAGCAATCAG GCCGCATACC ACGGCGGTGG TCTCGGAAGT
CAATTCGGCG AGTTGACGGT AACCAACTGT ACGATCGTCA ACAACACAGC AGGAAGCAAA
GGCCCTCAAG TTTACCTGAA ACATGCAGAC GTTCCGCCCG TATTTACAAA CACCATTATT
CGAGACGGAT TTTCCGTAGG GTTCTGCACC CCCATCGTCA CATATTGCAA CATAACCGGG
GGCTATGCGG GGGATGGTAA CATTGATGCA GACCCTATGC TCAAGGCGAA CTTCCACCTG
AAAGCAACAT CCCCATGCAT TAATGCCGGC ACCATGACCG GCGCCCCGGC CACGGATATT
GATGACGACA CCAGGCCAGT CGGCAGTGGT TGCGATATTG GGGCGGATGA ATACTATTTT
ATTGATACGG ATGAAGACGG ACTGTCAGAT CCTTGGGAAA TGACATGGTT TGGTTCTCTT
GAAAGCCTGC CTGCAGATGA TCCGGACAAT GACGGCCGAA CCAACCTTGA AGAATATTTG
CAGGGTACCA ACCCCAGGCC CCTCATTGTG TCTCCTGGAG GTTCTATACA GACCGCCATC
GATCAATCGT TTGACGATGA TACGGTTATT CTCACCGATG GTACCTACAC CGGAGTTGGG
AATAAAAACC TGGACCTCAG TGGCAAACCA ATCCTCGTAA CGTCAGAAAA TGGGCCCACA
ACCTGCATTA TTGATTGCCA GAATGACGGT CGGGGGTTTT ATTTCCATTC AGGTGAAACG
CCGGAGACGA TTCTGTCCGG CATTACAATC CAGAACGGTT CGGTCCAGGA TTCCGGTGGC
GGGATATATT GCACCAATGG TTCTTCCCCG TCCATTTCAA AGTGCATTCT TACGAATAAC
GCGGCAACGG ATGATGGCGG CGGTATAAGC TGCGATGCTG CCTCTGGTCC TGCAGTTATC
AACACGATTA TTGCAAACAA TTATTCCGAA GGAGACGGCG GCGGCCTTAG TTGCTCATAC
GCTGGCCCTG TCATCATCAA CTGTACTATT TTAGACAACA GCTCAGCAGG GGTAAATTCC
CAGGTGTATT GTTCACAAAC AGAAGGCCAA AACCCTGAAT TCATCAACTC TGTAATCTGG
GGAGGAAATT TTCTCCCATT CCATTCCACC CCCATTATCT CCCACTGTAT CATCAGTAAC
AGCAGTTATA ATGGCGTAAA CGGGAACATC ACCAAAGACC CGAAGATATC GGCTGATACA
GGATATTATC CCCTCTACGG CTCACCGTGT ATCAATGCAG GAATCTCCAC AGGCGCACCG
ACGGACGATA TTGAAGACAC ACCCCGACCG AAATACGCCA TTGTCGACAT CGGCGCATAC
GAGTTTTTTG TTCCCAACGA CAACGATGAA GACTATATGC CCGACGACTG GGAAACGACA
CACCTGGGGA CCACCACCTA CGGGACATAT GACGACCCGG ACGGTGATAC TATCTTCAAT
CTCTGGGAAT ATCTGATCGG TTATAACCCC GGCGTTGACG ACAGTAACCT TGCCAACACC
AACGACTATG ACGGAGACGG GATATCGGAC TGTGTTGAGA GTAGGTTCGG CAGCAGCCCA
ATTGACTCCG ACGACACCCT TGTACCGGTC GGCTGCCCCG GAACCATGGG TACATATTAC
GAGTATGACG AGCTTGGAAG GATAAGGTCC ATAATTCGGC TGAAGTAA
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| Protein sequence | MYNSLIMEGR QKLRSKTNRC LFTPILFILT IFGIFLSVTA FAATINVQPG GSIQAAIDQA
VSGDTVLVAD GTYTGTGNLN IDFNGKAITV ISENGPTACI IDCQSSGRGF LFDSNETSDS
LLSGFTITNG SADDGGGISC DYGASPTIEN CIIQDNSASD DGGGICCENG AAPVIKNCVI
QDNTSGDDGA GVYGQDSGTN PSLINCIITN NHADSSGGGT GCKDGKITVL NCTIVRNTAN
SAGAQVFLYN AQSGVVFKNA IIGTGFYKAN CTPAVTYCNI DGGYTGEGNI DADPMLTADF
HLQEGSPCID AGTSTGAPAT DIDGDTRPAG SGIDIGADEH LLIDIDEDGL SDAWEMTWFG
SLEYGPNDDP DNDGLTNLEE YNLGTNPNAT PIIVSPGGSI QAAIDQASNG DTIIVSDGTY
TGTGNVNIDF NGKAIIVRSE NGPAACIIDC QSSGRGFYFH SGETATSVLS GFTIQNGSAG
DGGGISCDQG ASPTIKHCIV RNNSASDDGG GIACENGSAP IISGCIVKEN TCSDDGAGIF
CDDSGTHPIV TNCIITDNQS QGSGGGIGCQ DGSKATVVNC TIVDNTASAY GDQVFLIQSS
SVFKNSIIGS DFFKYNCTPT VTYCNIAGGY SGEGNINADP MLTADFHLQE GSPCIDAGTL
TDAPTTDIDG DIRPEGSGID IGADEYLFID TDEDGLSDDW EIRWFGSLEY GPIDDPDNDG
LTNLEEYNQG TRPVYITVSP GDSIQAAIDQ ALDGDTIIVA DGIYYEGDID FNGKAINVRS
DHGPTACIIN CQGYDRGFYF HSGETSTSIL DGFTIMNGST TYGGGISCDP SSPTIKNCII
QNNTASKHGG GVFSGENANP TIINCIITNN VSVSGGGIGC KKGTITVVNC TVVNNTTGDY
GSQVFLHQSD VQPVFTNTII RGEFYIDRCT PIVTYCNITG GYTGDGNIDA DPMLKADFHL
QEGSPCIDAG TLLDAPAIDI DRDTRPDGNG VDIGADEYCS GESCFVDNDG DGLSDTWEMT
WFGSLDYGAS DDPDNDGLTN LEEYEQGTHP APITVSPGES IQAAIDLAIN GDVIVVEDGT
YYEWGIDFKN KAITVRSANG PTACFIDCRS NGRGFYFHSG ETSDSVLSGV TIKRGSATNG
GGISCVGASS PTIKNCIIQN NTASDTGGGI YCADRDTRPA IINCIITSNQ AAYHGGGLGS
QFGELTVTNC TIVNNTAGSK GPQVYLKHAD VPPVFTNTII RDGFSVGFCT PIVTYCNITG
GYAGDGNIDA DPMLKANFHL KATSPCINAG TMTGAPATDI DDDTRPVGSG CDIGADEYYF
IDTDEDGLSD PWEMTWFGSL ESLPADDPDN DGRTNLEEYL QGTNPRPLIV SPGGSIQTAI
DQSFDDDTVI LTDGTYTGVG NKNLDLSGKP ILVTSENGPT TCIIDCQNDG RGFYFHSGET
PETILSGITI QNGSVQDSGG GIYCTNGSSP SISKCILTNN AATDDGGGIS CDAASGPAVI
NTIIANNYSE GDGGGLSCSY AGPVIINCTI LDNSSAGVNS QVYCSQTEGQ NPEFINSVIW
GGNFLPFHST PIISHCIISN SSYNGVNGNI TKDPKISADT GYYPLYGSPC INAGISTGAP
TDDIEDTPRP KYAIVDIGAY EFFVPNDNDE DYMPDDWETT HLGTTTYGTY DDPDGDTIFN
LWEYLIGYNP GVDDSNLANT NDYDGDGISD CVESRFGSSP IDSDDTLVPV GCPGTMGTYY
EYDELGRIRS IIRLK
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