Gene Dole_1672 details

Gene Information

• Locus tag: Dole_1672
• ID: 5694509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 1987807
• End bp: 1989633
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641264267
• Product: AMP-dependent synthetase and ligase
• Protein accession: YP_001529553
• Protein GI: 158521683
• COG category: [I] Lipid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.47643
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCCC TTACGTTACA CACCCGGCCG GTGTGGCGGC ACAACGGTAA CATCCCCGAC 
CTGCTGAAAG GAGATTTCAT GGAAAAGCTT TCTTCCAACA TCATCGCCAA CAGCCTCAAC 
TTCCACGCCC GGAACAACGC GAACAGCCTT GCCATGGTGT ATGGAGAACG GCGAACCACA 
TGGAAGGAAC TGGGCAGCCG GGTCAACCGG CTGGCCAACG CATTGATCGC CGCGGGCGTT 
GGAAAAAACG ACAAGGTCGC CTTCATGTTT CACAACTGCC CGGCCTTTCT GGAGACCAAC 
TATGCCGTGC AGAGCGCCGG CGCCATTCCC GTTCCCGTCA ATTACCGTTT TACAGGGCCG 
GAGGTCACCT ACCAGGTCAA TCACAGCGAC GCCAGGGTGT TTATCTATGA AGCGACCTTT 
GCCGAGGCCG TGGAAGCGGC GGCGCCGCAG CTGACCAAAA TAGAACGGTT TGTCTGCCAC 
GGTCCGTCGG CCATTGCCGG CTGCGCAGCC TACGAAGATT TTTTAAACAG CGGCAGGCCG 
GACATTCCCC AGGTGGCCAC CGGCTGGGAC GACGTGGCGG TCATGGTCTA CACCGGCGGC 
ACAACAGGCT TTCCCAAAGG GGTCATGCTG ACCTATGCCG GCCACGTGGA CATGTTCTGC 
AACCTGTTTG CCTCCATTGT CACCCGCACG GCCGAGGTGA ACCTGACTGC CGAGCAACTG 
AAAGGGATCA CCAAAATCGT AGCCGTTCCG GGCATGGGGC TGGCGCCGGG ACTGCTGAAA 
ACCAGGCTTG CCAGAAAAAT CCTGTCCAGC AAAAAGGCCT ATACCTCCAT AGAAAAGGCG 
GTGCGCTACC TGCTCACCCA TCCGCCGGCA ACCCGCATCG GATACAAAAG CACGGTCCGG 
TTTATGACCC CGTCCATGCC TTTTTTCCAT GATGCCTCTT ACCAGATCCT GATGCTGGGC 
GTGCTGCTGG GCAACACCTG CCAGATCATG ATCGACGGCC TGAGTTTTGA CCCGGAAAAA 
ATCCTTTCCG CCGTGGAAGC CGAACAACCC CTGTTCATGG CCAATGTGCC AACCGGCTGG 
AAAAAGCTGG TCAGCTTTCC CGACTTTCAC AAGTACAACG TTAAATCCCT GCTGGCCATT 
GCCACCGGCG CCGGGGTCTG CCCCGTGGAC CTGAAAAAGA AAATGTTTGC AAAGTTTCCC 
GGCGTGCTTT TGCTGGACAT GTTCGGTCAG ACCGAGATGA CCCCCATCAC CAGCTTTCGC 
GTGGACACCG GTCCGGAAAA TCTTAAAGAA CGATCAGTGG GCAAATCGAT TCTCGATGTC 
CGGGTCGTTG ATGAAAAGGG CGACGAGGTG CCCCGGGGCG AGATCGGTGA AATCATGTAC 
CGGTCCGGCT GGATCATGAA GGGCTACTAC AAGGATGATG AAAAAACCGC CGAAGCCATG 
CAGGACGGGT GGTTCAAGGG TGGAGACCTC GGCTACATCG ACGAAGACGG TGAAGTGCGG 
CTGGTGGACC GCAAAAAGGA GTGCATCAAC ACCGGCGGGG AAAAGGTCTT TCCCCTGGAG 
GTGGAGGAGG TGCTGCATCA CCATCCGGCC GTGGATGACG TCTGCATCAT CGGCATACCC 
GACGAAGAGT GGGGCCATAC CGTGAGGGCC GTGATCAAAC CCGTGGCCGG CGCAACCCCG 
GCCCCCGACG ACATTCTTGC CTTCTGCAAG GGCAAGCTGG CCGGGTTCAA GATTCCCCGG 
TCCGTGGTCC TGGTGGAGGA GCTCCCCCTC TCCCCGGTGG GCAAGATGCT GCGGGCCAAG 
ATTCGGGAGT TGTACGGAAA GCCGTAA 

 

Protein sequence

MIALTLHTRP VWRHNGNIPD LLKGDFMEKL SSNIIANSLN FHARNNANSL AMVYGERRTT 
WKELGSRVNR LANALIAAGV GKNDKVAFMF HNCPAFLETN YAVQSAGAIP VPVNYRFTGP 
EVTYQVNHSD ARVFIYEATF AEAVEAAAPQ LTKIERFVCH GPSAIAGCAA YEDFLNSGRP 
DIPQVATGWD DVAVMVYTGG TTGFPKGVML TYAGHVDMFC NLFASIVTRT AEVNLTAEQL 
KGITKIVAVP GMGLAPGLLK TRLARKILSS KKAYTSIEKA VRYLLTHPPA TRIGYKSTVR 
FMTPSMPFFH DASYQILMLG VLLGNTCQIM IDGLSFDPEK ILSAVEAEQP LFMANVPTGW 
KKLVSFPDFH KYNVKSLLAI ATGAGVCPVD LKKKMFAKFP GVLLLDMFGQ TEMTPITSFR 
VDTGPENLKE RSVGKSILDV RVVDEKGDEV PRGEIGEIMY RSGWIMKGYY KDDEKTAEAM 
QDGWFKGGDL GYIDEDGEVR LVDRKKECIN TGGEKVFPLE VEEVLHHHPA VDDVCIIGIP 
DEEWGHTVRA VIKPVAGATP APDDILAFCK GKLAGFKIPR SVVLVEELPL SPVGKMLRAK 
IRELYGKP