Gene Dole_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1669 
Symbol 
ID5694506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp1985493 
End bp1986101 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID641264264 
Productputative GAF sensor protein 
Protein accessionYP_001529550 
Protein GI158521680 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AACTGTTCAA TTATGAAACG CTGCTGAAGA TCACCAATGC CATTTCCCAC 
TCCAAGGATC CGGAAGAGGT GGTACTGATC ACGGTGGAGA GCATCAAGAC CGCGCTGAAC 
GTAAAAGGGT GCACACTTTT TCTTATCAAC CGGCAGACCG ATGAACTGGA GGTGGCGGCA 
TCCTTCGGCC TCAGTGAGGA GTATATCAAC AAGGGACCGT TGAGCGCGCT CAAGTCCATT 
GGCGACTCCC TGAAGGAGGG GCCGGTGGCG ATTTTTGACG TGGCTGATGA TCCGCGCATT 
CAGTATCCCG AGGCGGCAAA AAAGGAGGGT ATCGCGTCAC TGGTTTCCGT TCCGGTGGTC 
AGCGGTGGGC GCATCATCGG GGCACTGCGG ATTTACACGG CTGAGCCGTG GGAGTTTACC 
CTGGAGAACT TGAATTTCAT CCAGGCCATG GCAAACATCA CCGGCATGGC CATCGGCATG 
GCCCGGCACT TGCGGGGAAT GAAGGAGAGC ATCGAAGTGC TCAAGACATT GAGAGACCCC 
AGGACACTGA AGTCTAAACG CAGGACGCCG TTTGAAGGGG TTCCCCGCAG TGTTTCGGTG 
GCTCATTGA
 
Protein sequence
MKKQLFNYET LLKITNAISH SKDPEEVVLI TVESIKTALN VKGCTLFLIN RQTDELEVAA 
SFGLSEEYIN KGPLSALKSI GDSLKEGPVA IFDVADDPRI QYPEAAKKEG IASLVSVPVV 
SGGRIIGALR IYTAEPWEFT LENLNFIQAM ANITGMAIGM ARHLRGMKES IEVLKTLRDP 
RTLKSKRRTP FEGVPRSVSV AH