| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1564 |
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| Symbol | |
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| ID | 5694401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1862587 |
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| End bp | 1863807 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641264159 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001529445 |
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| Protein GI | 158521575 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCCC ATGTTTCACA CCAGACGCCG GCGACTGCCC GCCCGGACAC GACCGGTCAT
TTTGAGCAGT ACGGCGGCAT GTACCTTGCC GAGACCCTGA TGCCGGCGGT CCTGGAACTG
GACGAAAAGC GGCGCCAGAT CATGATTGAC CCGGCGTTTC AAAAAGAGCT GGGGGGCCTG
CTGGCCGATT ACGTGGGCCG ACCCACGCCC CTGTTTTTCG CTAAACGGCT GACGGCCCAC
CTGGGCGGGG CCGCCATCTA TCTGAAGCGG GAGGACCTGG CCCATACCGG GGCTCACAAG
ATCAACAACA CCATCGGCCA GGCGTTGCTT GCCAAGTGGA TGGGTAAAAA CCGGGTGATC
GCCGAGACCG GGGCCGGCCA GCACGGCGTT GCCACGGCCA CGGCCGCGGC CCTGCTGGAC
ATGACCTGTG AAGTCTTTAT GGGGGTTGAG GATATCCAGC GCCAGGCCCC GAACGTGATG
CGGATGAAGC TGCTGGGCGC CACGGTGACA CCGGTGGACT CGGGTTCCGG CACGTTGAAG
GACGCCATGA ACGAGGCCCT GCGCCACTGG GTGGCCCGGG TGCGGGACAC CTTTTACGTG
ATCGGGTCCG TGGCCGGGCC CCATCCCTAC CCGGTGATGG TCCGCGACTT TCAGAGAATC
ATCGGCGATG AAACCCGGCG ACAGATACTG GAGGTCACGG GCCGGCTGCC GGACCTGCTG
GTGGCCTGCG TGGGCGGCGG CAGCAACGCC CTGGGAATTT TTTATCCGTT TCTTTCCGAC
ACCGTGGAGA TGGTGGGCGT GGAGGCGGGC GGCGAAGGCC TTGACACCAA TCGCCACGCC
GCCACCCTGA ACCGGGGGGT GACCGGCGTG CTGCACGGCT CAAAGTCCTA TGTGCTTCAG
GACCGGTTCG GCCAGATCGC GCCGGTGCAC TCGGTTTCCG CCGGCCTGGA CTATCCGGGC
GTGGGGCCGG AACACGCTTT TTTAAAGGAC ACGGGCCGGG TCAGATACAC GGCCATCGAC
GATAAAGAGG CCATGGCCGC CTTTCACCTG CTCTGCCGTA CCGAGGGCAT CATTCCGGCC
CTGGAAAGCT CCCATGCCGT TGCCTGCGTC ATCAAGGAAG CGCCCGGGCG GCCCAAAACA
GACATTCTCA TCGTCAACCT CTCCGGAAGG GGAGACAAAG ACCTGGGGAT CGTATCATCC
GTCATGGAAA AGGAGAAATA G
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| Protein sequence | MRSHVSHQTP ATARPDTTGH FEQYGGMYLA ETLMPAVLEL DEKRRQIMID PAFQKELGGL
LADYVGRPTP LFFAKRLTAH LGGAAIYLKR EDLAHTGAHK INNTIGQALL AKWMGKNRVI
AETGAGQHGV ATATAAALLD MTCEVFMGVE DIQRQAPNVM RMKLLGATVT PVDSGSGTLK
DAMNEALRHW VARVRDTFYV IGSVAGPHPY PVMVRDFQRI IGDETRRQIL EVTGRLPDLL
VACVGGGSNA LGIFYPFLSD TVEMVGVEAG GEGLDTNRHA ATLNRGVTGV LHGSKSYVLQ
DRFGQIAPVH SVSAGLDYPG VGPEHAFLKD TGRVRYTAID DKEAMAAFHL LCRTEGIIPA
LESSHAVACV IKEAPGRPKT DILIVNLSGR GDKDLGIVSS VMEKEK
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