| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1422 |
|---|
| Symbol | |
|---|
| ID | 5694257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1694221 |
|---|
| End bp | 1695150 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641264015 |
|---|
| Product | chaperone DnaJ domain-containing protein |
|---|
| Protein accession | YP_001529303 |
|---|
| Protein GI | 158521433 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000419249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAA CCGATTACTA CAAGATTCTG GGTGTGGAGA AAAACGCCAC TGACGAGGAG
ATTAAAAAGG CCTATCGAAA GCTGGCGATG AAATATCACC CGGACCATAG CAAGGGCGAT
AAGAAAGCGG CGGAAGAAAA ATTTAAAAAG ATCAGTGAAG CCTACGCCGT GCTCAAGGAT
AAGGAAAAGA GGAAACAGTA CGATACATAC GGCGCCAATG GTTTTCATGA GCGGTACTCC
CAGGAGGATA TTTTCCGGGG GTTTGATTTT TCCGATATTC TAAAGGAATT CGGTTTTGGC
GGGGGCGGTG GCTTTTTCTC CGGCGGCGGC CGGGGAGGTG GTGCCCGCTT TTCTTTCGAC
GGTGGTTCTC CCTTTGGCGG CGGCGGCCCC CGGCAGACGG CCGCAGTAAA GGGGGAGGAC
GTAGTGTACG AGCTTCCCGT TACGATTCAG GAGGTCGTCT CCGGCACCAC CAAGGCGGTT
TCCCTTCGTC ATGGCGGCGG CACCGAAACT GTCAACGTGA AAATTCCAAA GGGTATGGTG
TCCGGCAAGA AGATACGGCT TGCCGGAAAG GGCCAACCCA GCCGGTTTGG CGGTCCTTCA
GGGGATATGT ATATTCAGGC AAAGCTGGTC AAGGACCCGG TGTTCGAAGT GGACGGCTAC
GACCTCTATA TGACCACAGG CGTCAAACTC ACTGACGCCT TGAAGGGAAC CCGGATCACG
GTGGCCGGGG TGGACGGCAA AGACCTGAAC CTGCGGGTGC CGCCGGGCAC CCGGCACAAA
AGCAAGCTGC GGCTTGCCGG GCAGGGGATT CCCCACATGA GGGGCGCGGG CCGGGGCGAC
CTGTACGTTG AAATTCAGGT GGAGATGCCG TCCAAATTGA CCGATCAGCA GAAACAGCTG
GTCGAAGCCC TTGCCGAAAC CGGTCTGTAA
|
|---|
| Protein sequence | MAETDYYKIL GVEKNATDEE IKKAYRKLAM KYHPDHSKGD KKAAEEKFKK ISEAYAVLKD
KEKRKQYDTY GANGFHERYS QEDIFRGFDF SDILKEFGFG GGGGFFSGGG RGGGARFSFD
GGSPFGGGGP RQTAAVKGED VVYELPVTIQ EVVSGTTKAV SLRHGGGTET VNVKIPKGMV
SGKKIRLAGK GQPSRFGGPS GDMYIQAKLV KDPVFEVDGY DLYMTTGVKL TDALKGTRIT
VAGVDGKDLN LRVPPGTRHK SKLRLAGQGI PHMRGAGRGD LYVEIQVEMP SKLTDQQKQL
VEALAETGL
|
|---|
| |