| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1416 |
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| Symbol | |
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| ID | 5694251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1685926 |
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| End bp | 1686543 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641264009 |
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| Product | hypothetical protein |
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| Protein accession | YP_001529297 |
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| Protein GI | 158521427 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00239057 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCATAG GCGCATGGTC AGGCGGGCCA CCCCTTCCGG ACCCGGCCGG GCCTTTCAAG
ATGTGCCTGA AGTCGCTTGA CTTTTTATCC CTTAAAAGCG TATGCTGTCC GTCAGACAGA
CAGACACTCC CCTGCGGAAT GGAAAATCAC GCCATGCGGT TATCACCTTC AAAAAAATCA
TCGGGATTTA CCCTGCTGGA AATCGTTGTG GTGCTGCTGG TGCTGGGCAT TGTCTCCACC
GTGGTGATTT CCCGCTACGT CAATGCCAAT GCCGATGCCC AAAACGCGGC CCTGATGGGC
AAGATCACCT CCCATCTGCG ATATGCCAGA AACGCGTCAA TGAACTCGGA TGCCACATGG
TGGATCGATT TTGATTCAGG CGCCTATCGG TTATACAAAC GAGATGCCGC CGGCACCGAT
ACCAGTGCCG TGTTTCCAGG GGAAGGTGAG CCGGTCGTTG ACCTGCCTGA CGGATTCGGA
ACGAACATCA ACGTTTTTTT TGACGGCTGG GGCCGGCCCA CGGACAGCGG CGGGACGCCG
ATCACAACCG TACCCGCCCA CACACTGCCA TTTTCCGGCG GCACCATCAC CATAGAACCC
ACGGGCTATA TTCGATGA
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| Protein sequence | MPIGAWSGGP PLPDPAGPFK MCLKSLDFLS LKSVCCPSDR QTLPCGMENH AMRLSPSKKS
SGFTLLEIVV VLLVLGIVST VVISRYVNAN ADAQNAALMG KITSHLRYAR NASMNSDATW
WIDFDSGAYR LYKRDAAGTD TSAVFPGEGE PVVDLPDGFG TNINVFFDGW GRPTDSGGTP
ITTVPAHTLP FSGGTITIEP TGYIR
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