| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1335 |
|---|
| Symbol | |
|---|
| ID | 5694169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1591895 |
|---|
| End bp | 1592464 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641263927 |
|---|
| Product | molybdopterin oxidoreductase Fe4S4 region |
|---|
| Protein accession | YP_001529216 |
|---|
| Protein GI | 158521346 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA ACAGACGCCA GTTTCTTAAA TTTTCGGGAG CGTCCATTGC GGGGATCGCT
TTCGGCACCC TGGGCCTCGA TCTCTCGCCC ATCGAGGCAT ATGCTTACTC CTTACGGACC
CTGCACGCAA AGCAGACCAC CACTATCTGC CCTTACTGCG CCGTGGGGTG CGGCATTCTC
GTGCATACCA TCAACGACAA AGTGGTCAAC ACCGAAGGAG ACCCGGACCA TCCCATCAAT
GAAGGCAGTC TCTGCAGCAA GGGAATGGCG GTTTACCAGC TTTCCCACAA CAACCCCAAC
CGGCTCACCG TGCCGCTGTA CCGTAAGCCT TACGGCACCC GGTGGGAAGA GGTGTCGTGG
GATTTTGCCT TGGACAAAAT CGCAAAAAAC ATCAAGACCT CACGGGATGC CAGCTTTGAG
GCGGTCAACG CCAAGGGACA GGAGGTCAAC CGGACCATGG GCATCGCCTC CCTGGGCAGC
GCGGCCCTGG ACAACGAGGA GTGTTACATC TACCAGAAAT TGCTTCGCGC CATGGGCCTG
GTGTATATCG AACACCAGGC GCGTATCTGA
|
|---|
| Protein sequence | MDINRRQFLK FSGASIAGIA FGTLGLDLSP IEAYAYSLRT LHAKQTTTIC PYCAVGCGIL
VHTINDKVVN TEGDPDHPIN EGSLCSKGMA VYQLSHNNPN RLTVPLYRKP YGTRWEEVSW
DFALDKIAKN IKTSRDASFE AVNAKGQEVN RTMGIASLGS AALDNEECYI YQKLLRAMGL
VYIEHQARI
|
|---|
| |