| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1293 |
|---|
| Symbol | |
|---|
| ID | 5694128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1544242 |
|---|
| End bp | 1545213 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641263887 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_001529176 |
|---|
| Protein GI | 158521306 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAC GCAGTGACTC AGCCGTCAAA TTGTCTATTG TCGTTCCAGT GTACCAGAGC
GCTGATATTT TGCCGAAACT GGTAGAGGAA GTGCTTGCAG CAGTGGAGCC CCTGGGACTG
GCGGACCGGT TTGAACTGTT GCTGGTCAAT GATGCAAGCC CGGATCAGAG CTGGCCGGTT
ATTCAGTCGC TTGCCCGGTC TCACGCTTTT ATCAGAGGTA TCTCCCTGCG TCGAAATTTT
GGTCAGCACA ATGCCCTGAT GGCCGGCCTC AATCACGTTA ACGGCGATTT TGTGGTGATG
ATGGATGATG ATCTGCAACA TCCCCCCGAT GCTATTGGTG ATTTGCTGGA CGCCCTGGAG
CAGGGCTACG ACGTGTGCTA CACCCGTTAC CGGCACCGGC GGCATGCCTT GTGGAAACAG
GTGGGAAGCC GCTTCAACGA CTGGGTGGCC ACCCGTCTGC TGGATAAGCC CAAGAATCTC
TATCTCTCTT CTTTTAAAGC GATGCGCAAG GAGATCACGC GTGAGATAGT GAAATATGAT
GGCCCTTATG CCTATCTGGA TGGACTCATT CTTGATGTCA CACGTTCAAT CACGGTGGTA
GAGATTGCGC ACCAGCCCCG TTATGCCGGG GAAAGCAACT ATACCCTGCG CCGCCTGCTC
TCGCTGTGGC TGAAAATGGC CACCGGTTTT TCAGTCTTCC CACTGCGCCT GGCCACCTAT
GCCGGCTTTC TTCTTTCCGC TCTGAGTTTT ATCATGATGG CGTTTTTTGT TATTCAGAAA
CTGCTGTATC CCGAGATTCC CAGAGGCTGG GCGTCATTGA TCGCAACCAT TTTATTTCTG
GGCGGCATGC AGACTTTTTT TCTGGGTTTG ATTGGTGAAT ATCTGGGACG CACCTATCTC
AAGCTTAACC AGAAAGCGCA GTTTGTTGTT GGCAGCACAA CCTGGGACAG GAATAGCGAT
GAAGTGTCAT GA
|
|---|
| Protein sequence | MGKRSDSAVK LSIVVPVYQS ADILPKLVEE VLAAVEPLGL ADRFELLLVN DASPDQSWPV
IQSLARSHAF IRGISLRRNF GQHNALMAGL NHVNGDFVVM MDDDLQHPPD AIGDLLDALE
QGYDVCYTRY RHRRHALWKQ VGSRFNDWVA TRLLDKPKNL YLSSFKAMRK EITREIVKYD
GPYAYLDGLI LDVTRSITVV EIAHQPRYAG ESNYTLRRLL SLWLKMATGF SVFPLRLATY
AGFLLSALSF IMMAFFVIQK LLYPEIPRGW ASLIATILFL GGMQTFFLGL IGEYLGRTYL
KLNQKAQFVV GSTTWDRNSD EVS
|
|---|
| |