Gene Dole_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1279 
Symbol 
ID5694114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1530341 
End bp1531723 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content61% 
IMG OID641263873 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_001529162 
Protein GI158521292 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAT CATTTGAAAA GAAAATTCTG TGTATCGGCG CCGGCTATGT GGGCGGTCCC 
ACCATGGCGG TGATTGCCGA TAAATGCCCC CGGTACAAGG TCACGGTGGT GGATATCGAC
GCCGGTAAGA TCGCGGCCTG GAACTCTGAT ACCCTGCCGG TGTACGAGCC GGGCCTCCTG
GATGTCGTTC AACGGGCAAG GGGGAAAAAT CTTTTCTTTT CCACGGACGT GCCTGCCGCC
ATTGCCGAGG CGGACATCAT TTTTGTCAGC GTGAACACCC CTACCAAGGC CACCGGCGTG
GGCGCGGGCA TGGCCGCCGA CCTTCGTTAC TGGGAGAACA CGGCCCGGCA GATTCGCCAG
TGCGCGGACA CCCCCAAGAT CGTGGTGGAA AAGAGCACGG TGCCGGTAAA AACCGCTGAA
GCCATGGCCC AGATCCTGTC CATGGAAAAC GGCGGCAATC TGTTCGAGGT GCTTTCCAAC
CCGGAATTTC TGGCCGAAGG CACGGCCGTT GCCGACCTGG AAAACCCGGA CCGGGTCGTG
ATCGGTTCCC GGCAGACACC CGAAGGTGTG GCGGCCCGGG ATGTGCTGGT GGAGGTCTAC
GCCAACTGGG TGCCCCGTGA AAAGATTCTC ACCTCCAACA TCTGGAGCAG TGAAATGGCC
AAGCTGGCGG CCAATGCCTT TCTGGCCCAG CGGGTCTCCT CCATCAACAC CATTGCCAAC
ATCTGCGAAA GTTCCGGCGC CAACGTGCAG GAAGTCTCCA GGGCCGTGGG CATGGACCGG
CGCATCGGGC CGAAGTTCCT CAATGCCGGG GTGGGGTTCG GCGGGTCGTG CTTTAAAAAA
GACATTCTGA GCCTGGCCTA TCTGTGCCGG GAGGCCGGGG CCGACGCCGA GGCCGACTAC
TGGGAAAGCG TGGTGCGCAT CAACGAGCAC CAGAAGGAGC GGTTTGTCCG GCGCATGCTG
GACGCCATGT TCCACAGCAT GGCGGATAAG CGGATCGCCC TGTTCGGGTT TGCCTTCAAG
CCCGATACCG GCGATATTCG GGACGCGCCG GCCATCACCA TCGCCGGGCG GCTCCTTGAT
GAAGGGGCCG TGCTGGCCAT CAGCGATCCC AGGGCCCTGG ACGGGGCCCG GTCCGTGTTC
GGCGATGCCG ATGGCCGGGT GGAGTACGTG GAAGATCCCT ACGAGGCCGC AAAAAAGAGC
CATGCCATTG CCGTTCTCAC CGAGTGGCAG GCATACCGGG ATCTCGATTA TACCGCGATA
TATGCCGCCA TGGAGAAGCC GGCCTTTTTC TTTGACGGCC GGAACGTGGC CGACCATGCC
GCGCTTTTTG ACATGGGGTT TAATGTCTAT CCGGTGGGGA TGCCGGCAAT GACCCATTTT
TAA
 
Protein sequence
MAQSFEKKIL CIGAGYVGGP TMAVIADKCP RYKVTVVDID AGKIAAWNSD TLPVYEPGLL 
DVVQRARGKN LFFSTDVPAA IAEADIIFVS VNTPTKATGV GAGMAADLRY WENTARQIRQ
CADTPKIVVE KSTVPVKTAE AMAQILSMEN GGNLFEVLSN PEFLAEGTAV ADLENPDRVV
IGSRQTPEGV AARDVLVEVY ANWVPREKIL TSNIWSSEMA KLAANAFLAQ RVSSINTIAN
ICESSGANVQ EVSRAVGMDR RIGPKFLNAG VGFGGSCFKK DILSLAYLCR EAGADAEADY
WESVVRINEH QKERFVRRML DAMFHSMADK RIALFGFAFK PDTGDIRDAP AITIAGRLLD
EGAVLAISDP RALDGARSVF GDADGRVEYV EDPYEAAKKS HAIAVLTEWQ AYRDLDYTAI
YAAMEKPAFF FDGRNVADHA ALFDMGFNVY PVGMPAMTHF