| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1073 |
|---|
| Symbol | |
|---|
| ID | 5693908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1267973 |
|---|
| End bp | 1270480 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641263669 |
|---|
| Product | molydopterin dinucleotide-binding region |
|---|
| Protein accession | YP_001528959 |
|---|
| Protein GI | 158521089 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGT GGCATCCATC ATGTTGCATG TTATGCGGCA TGAACTGTGG TTTGGAACTG
CTTGCTGAAG ATAATAAAAT TATCAAAGTC AAGCCGATGC AAGATAACCC CAGAAGCAAA
GGGTACATCT GCCGCAAGGG AATGAATGTT GTCGATTATC AGCATCATTC AAGTCGGTTA
ACGCATCCCT TGAAAAAATC CGAACAGGGA TTTGAAAAAA TATCCTGGGG TCAAGCCATC
CGGGAAATCA GTGAAAAACT TAAAGCTGTG ACAGAACAAT ACGGTCCTAA ATCGTTTGCA
TACTTGGGCG GTGGCGGTCA GGCGTGCCAT TTTGAAGCAT TTCTGGGATT GCAGCTTATG
CATTCGCTGG GTTCAAAATA TCATTACAGT GCCCTTGGAC AGGAATTGAC CGGCCACTTC
TGGGTCTACG GAAGGGCACT TGGAAAGCAG AATTGTTGGC CAGCCCCCGA TGAAGCAAAC
TCGGATATGC TGATCGCAAT CGGCTGGAAT GCCATGGAAA GTCACCAGAC GCCACGGGCC
CCCCTTATTA TGAAAGAATT TTCTAAAAAC CCGGAAAAGT GTCTGGTGGT GATCGATCCC
CGAAAATCAA AAACTGCCAG AATTGCTGAT ATCCATGTTC CTGTCCGTCC GGGAAGTGAT
GCCCTGCTGA TTCGCGCCTT GATTGCCATG CTGGTGGATA AGGATCTGCT CAATCATCAA
TATATGAAAA AACATGTGTC TGGCTGGGAA AGAATCAAAC CCTGGTTTGA AAATTTTGAT
TATCGAACAG CGATATCCGT TTGTGAAGTG GACTATGACC AGGCTGAAAA TCTGTGCCAC
CTGCTTGCCA CACGGAAATG GTGCATGCAT GCTGAGATGG GCGTATTAAT GAACCGGCAC
AGTACCGTCA CCTCTTATCT GCTCGTTATT TTGACGGCCA TTTGTGGACG GCTCCTGGTC
CCAGGAGGCG TTGTGATTCC GGGGAAAATG GTCCCATTAG GTTTTCATAC GGATGAACGG
GATGATAACA ACTGGCGGAC CCAGACCACG GATTTCCCGG CTATTGATGG ATTTTATCCG
CCTAATGTAA TGCCGGAAGA GATATTGAGT GATCACCCCG AACGACTGCG GGCCGTTATT
ACCTGTAACA GCAATCCGCT CAGGTCCTAT GCGGATACGC CCGCGTATGA AACTGCTTTC
AAAAAGTTGG ACTTACTGGT GTGCATCGAT ATCGTCATGT CTGAAACAGC GGAGCTATCG
GACTATGTAC TCCCGGCCCG TTCCGGTTTT GAAGGATGGG ATGGCTGCTT TTTTTCCCTG
ACCCATCCGG AAATATATTT TCAGATGAGA CATCCTTTTA TTGTCCCGGA AGGCGACACG
CTTGAGGCGG GAGAGATATA TACACGGATT GCCGACAACA TCGGTCTTAT CCCGGACATC
CCTGATACCC TTTATAAAGC GGCTAAAGAG GACAGGCTTG CCTACGCCAT GGCACTTTCA
ATCTACGCAT ATGAAAACCC GGAAGCGTTA AGACGCCTCC CTTTTATCAT TACCAAAACG
TTAGGACCGG CATTGGGGTC CGCCCATCTT GCTATGTTGT GGGCGATTAT CCAGCAAATG
GTAGTGAATT ACAAAGCGCC CAATGGCAAA TTAATGGAAT CGGATGACCT TTTTTTACAC
CTGGTAAATG AACAGGATAG TTTGACGCTT CTTCCGGATC TGCCGAAATG GCTTAAGCGA
TCACGGTACT CGAAAATAAT CATGACCATT CTCATCCTTT CACGCATTCG TCCTTCAGAT
CTTATATGGG ATCTTAACCG GCATGGATTT ACCCTGGTTC AAGCCATTAA AGACACCTTT
GCCCCTAAAA GCGTTTTTAA AATATTAAAA ACAGTTATTG CCAGCAGAAG TTTACTGCCG
CTGATGCAGT TATCTCCCTA CATGGCGCTG TCAGAACGCG TATTTAATGA AATCCTTGAA
AACCCCAGGG GGTTGATCAT TGGCAAAAGT AATGCGGATA ATTTTACCAG TATCAGGACT
TCTGACAAAA AAGTTCAGCT TCATATGCCG GAACTGGCTG AGTGGCTCCA ATCGATCACC
GCTGATTCGG AAGAAAAGGA ACTCGCCCTG GACCCGGCTT ACCCGCTGAT TCTGAATGCC
GGCAGCCACA TGCCGGCCAA TGCAAATACG CAGGTCAGAA AACCTTCATT TATTGGTAAA
ACCCGAGGGT GTACCCTTTT GATGAATCCC CGGGACGCAG ATCTTCTCGA TCTGAAAGAT
GGTGAAATCG TTAATATCGT CACAGAGGCC GGTAGAGAGC AAGTAGAGAT AGAAATCACA
AAAAATGCGC GCAAAGGCCA GGTGGTCATG CCCCATGGAT TTGGATTGAA ATACGAGGGG
AAGGTTTACG GTGCCAATGT AAATCTTTTG ACGAAGAATA CACACCGCGA CAGATGGGCG
GCAACTCCGT ATCATCGGTT TGTGCCATGT CGAGTAGAAA AAATATGA
|
|---|
| Protein sequence | MEQWHPSCCM LCGMNCGLEL LAEDNKIIKV KPMQDNPRSK GYICRKGMNV VDYQHHSSRL
THPLKKSEQG FEKISWGQAI REISEKLKAV TEQYGPKSFA YLGGGGQACH FEAFLGLQLM
HSLGSKYHYS ALGQELTGHF WVYGRALGKQ NCWPAPDEAN SDMLIAIGWN AMESHQTPRA
PLIMKEFSKN PEKCLVVIDP RKSKTARIAD IHVPVRPGSD ALLIRALIAM LVDKDLLNHQ
YMKKHVSGWE RIKPWFENFD YRTAISVCEV DYDQAENLCH LLATRKWCMH AEMGVLMNRH
STVTSYLLVI LTAICGRLLV PGGVVIPGKM VPLGFHTDER DDNNWRTQTT DFPAIDGFYP
PNVMPEEILS DHPERLRAVI TCNSNPLRSY ADTPAYETAF KKLDLLVCID IVMSETAELS
DYVLPARSGF EGWDGCFFSL THPEIYFQMR HPFIVPEGDT LEAGEIYTRI ADNIGLIPDI
PDTLYKAAKE DRLAYAMALS IYAYENPEAL RRLPFIITKT LGPALGSAHL AMLWAIIQQM
VVNYKAPNGK LMESDDLFLH LVNEQDSLTL LPDLPKWLKR SRYSKIIMTI LILSRIRPSD
LIWDLNRHGF TLVQAIKDTF APKSVFKILK TVIASRSLLP LMQLSPYMAL SERVFNEILE
NPRGLIIGKS NADNFTSIRT SDKKVQLHMP ELAEWLQSIT ADSEEKELAL DPAYPLILNA
GSHMPANANT QVRKPSFIGK TRGCTLLMNP RDADLLDLKD GEIVNIVTEA GREQVEIEIT
KNARKGQVVM PHGFGLKYEG KVYGANVNLL TKNTHRDRWA ATPYHRFVPC RVEKI
|
|---|
| |