| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1037 |
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| Symbol | |
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| ID | 5693872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1221777 |
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| End bp | 1223237 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263634 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001528924 |
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| Protein GI | 158521054 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.13729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGCA GGGTTCTGGG TATTGATATC GGCAACACCA CGGTCTGCGC GGTTCTGGTG
GGCCCCGGCG AAAGCGGCCT TCGCATAGAG GCCCACGCCC ATGCGGCAAT GGGAAAGGAC
GTCTCCCCCT GGCAGGTGCT GCCCGGTGTG CTGGACGCCC TGGGTCACCG GGCCGACTGG
TCGGGTGCGG CCTGCGTGGC CACCTTCCCG GACCGGCAGG TCTCCTACAG GCGTATTCAT
ATGCCGTTTG CCGACCCCCG GAAGATCGAA AAGGTGATTG CCTATGAACT GGAGCCGCTG
CTGCCTTTTG CGCCGGCGGA CCTGTTTATC GATTTTGTGG TGCTTTTCCC GGCGGTTTCC
CAGGAAAACG AGGCGGGCGT CGAGGTGCTG GCCGCGGCGG TACACAAGGA AAAGGTGAAG
GAGTGGATTG ACGGGTTTGC CGGTGCCGGT CTGCAGCCGG AAATGATCGT GCCCAGAGGA
TGGGCCGCCG CCGCGGTGCT GTCGGCAGAT ATTGAGGAAG CCCTGCTGGT GGAGACTACC
GGTGGGTATG TGACAACGGC CGTGGTTGGC GGCGGGGATG CCCAATGGAT CCGGTTTTTT
TCAGCCGGCC CGCCGCCGGA TCAGGAGGCG GGCCGGTCTG CGCTGCGCGA CGGCCTGCGC
CAGACCCTGC TGGCCTATGA ATATGAAACA GGGGTTGCCG CGGGGCTGAA AAACGTCTTT
GTGACCGGTG CCGATTCCCG GGCAGGGGAG GCGGTAAAAA CGGTTGCCGA CTGCCTGGGA
ATTGATGCCC GGCCGTTTAA CATGGCGGAC GGCTCTTCCC TGGTGACGGG TGGCCGGCCC
GACCATACCT GGGAGCCGGG CCTTCTGGAC ATGGCGCTCT GCCCGGCGTT GCTGAAGAAA
AGCCGGAAGC CCTGTATTAA TTTTCGGAAA GGGGAGTTCT CCCTGGCGGC CAGGTGGTTG
CAATACCGGT ACCTGTTCGG TGGCACCGCC GCGCTGGCGG CACTGGTGCT GGTACTCGGC
CTGATGGGTT TTTTTTACGA CCTTTATTCT CTCAATCGGT CCATAGCGAC TGTGGATGCC
CGGCGGCAGG CGATTTTCCG GGAGTGCTTT CCCGAATCGG CGGCAGCACC GTCTGCCGAG
ATGATGCGCT ACGAGATCGA CAGGCTTCGT GAATCCAGTG GCCTGCCTGC CGGACTGGAC
CGGACTGTTT ACCAGGTGGA TATATTGAAC GACATCAGCC GCCTGGTGCC CCAGGAGACG
GATGTGGTGA TCACCCGCCT GGACGCGGGG CTCAATGATG TTTCCGTCAC CGGCAACACG
GATGCTTTTC AGTCCGTGGA CACCATGAAA AACAGGCTTG AGGAGAGTGA TCTGTTCGGG
ACCGTTGTCA TCAGTTCCGC CACCATGGAT AAAGCCGATA AACGGGTTCA CTTCAAGTTG
CAGGTGGAGC TGAAGTCATG A
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| Protein sequence | MDGRVLGIDI GNTTVCAVLV GPGESGLRIE AHAHAAMGKD VSPWQVLPGV LDALGHRADW
SGAACVATFP DRQVSYRRIH MPFADPRKIE KVIAYELEPL LPFAPADLFI DFVVLFPAVS
QENEAGVEVL AAAVHKEKVK EWIDGFAGAG LQPEMIVPRG WAAAAVLSAD IEEALLVETT
GGYVTTAVVG GGDAQWIRFF SAGPPPDQEA GRSALRDGLR QTLLAYEYET GVAAGLKNVF
VTGADSRAGE AVKTVADCLG IDARPFNMAD GSSLVTGGRP DHTWEPGLLD MALCPALLKK
SRKPCINFRK GEFSLAARWL QYRYLFGGTA ALAALVLVLG LMGFFYDLYS LNRSIATVDA
RRQAIFRECF PESAAAPSAE MMRYEIDRLR ESSGLPAGLD RTVYQVDILN DISRLVPQET
DVVITRLDAG LNDVSVTGNT DAFQSVDTMK NRLEESDLFG TVVISSATMD KADKRVHFKL
QVELKS
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