| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0990 |
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| Symbol | |
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| ID | 5693825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1160308 |
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| End bp | 1163565 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641263587 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001528877 |
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| Protein GI | 158521007 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATCG AGGATGAAGA AAGCTTGCAG ATGTATGTGG AAGAGTCCCT CGACCACATG
GCAAACATCG AAAACAACCT CCTGGCCATT GAAAAAGGCG GTGACAGCGC GGATCCGGAG
ATCGTCAACG AGGTGTTTCG CGCGGCCCAC TCCATCAAGG GCGGGGCCGG GCTCATGGGG
CTTAACAACA TCAAGGAACT CTCCCACCGG GTGGAAAGCG TACTGGGCAT GATCCGGGAA
AAAAAGATCA CTCCGGACGC CAGCATCATC AGCATTGTCC TGTCCGCCTT TGACAAGCTC
TACGAGATGG TCACCCACAT TCGGGAGAGT GAAACCATCG ATATTTCTGA GGAAGTGGTT
TCCCTCACCG GTCTGACCAC GGCATCCCTG CCCGCCGCCA GGAAACCGGA CGTGACAAAG
ATGATCAACA TCCTGCCCCC GGACGGCGGC CCCGCCCTGT TCCAGATAAG CCGTCTGGAT
CTGGACAAGG CCCGAAAAGG GGGACGGGAT CTTTACCTTA TTGAATGGGA CCTGATCCAG
GATATTCACG AGCAGGAGCG GTCCCTGATG GAAATGATGA AGTCGGTCTC CATGAGCGGC
GACGTGCTGG ACATAACCAT GAAAATTGAG GCTGTGGGTA CGCTGGAGGA AGGGACCCCT
TCCCGAATCC CCATCCTGAT GCTCTACTCC TCCCGCATCG GCGACGATAT CCTGCCGTCG
CTTTTTAATG TTGAGCGGCA CCAAGTTCAC CGGGTGACCG AGGCGATGAT GGTGCCCGCG
GAAGCCGATA AACCGACCCC GGTCCGGCCC GACGCCGGTA TGCCGGAAAC GGCACAATCA
TTTACGACGG AAACGACACC CGCCCCGGAG GCCACGATGC CGGACGTTGC TGATGAGGAC
CGGCCCGCGG CCCTCGACAC CACAGACACC GTGTACGCGG ATGAGGATGA CGGCCTGACC
ATCGACAGCC TGAAAGGCCC CCATGTCAAG GCGGCCCTTT CCCAGACATC GCTGCGGGTG
GATGTCAAGC TACTGGACAA CCTGATGACC CTGGCCGGCG AGATGGTGCT CAGCAGGAAC
CAGTTAATCC AGAGCCTGAC GGCCCAGAAC GCCAAAACCA TTGCATCGGC GGCCCAGCGG
ATCAACATGG TGACCTCGGA GCTGCAGGAT GTGATCATGC GCACCCGCAT GCAGTCCATC
GGCACCATCT TCAACAAGTT TCCCCGGCTG GTGCGGGACA TGTCCCAGAC CCTGGGCAAG
AAAGTGGAAC TGACCATCGA AGGCACCGAC GTGGAGCTGG ACAAGACCAT TATCGAGGCC
ATCAGCGAGC CCCTGGTGCA TCTGGTCCGC AACTCCGTGG ACCACGGTAT CGAACCCCCG
GGCAAACGGG CCCAGCTGGG CAAAAGTCCC ATCGGCCGGA TTCACCTGGC GGCCCTGCAC
GAAGCCGGAC AGGTCTCCAT TGAAATCACC GACGACGGCA ATGGCATCGA CGATCAGCTC
ATCGTGGCCA CGGCCCTGCG AAAGGGATTG ATCGCCGAAC GCCGCGTGGC CGACATGTCC
AGAAAAGAGA AAACCGAACT GATTCTGCTG CCGGGCTTTT CCACCTCGGA TAAAGTCACC
GATGTGTCGG GCCGGGGCGT TGGCATGGAC GTGGTCAAGA CCAACCTGGA AAAACTCAGC
GGCACCATGG ACATCGACTC GGTGCCCGGT AAATATACCA CCATCAGCAT CAAGCTGCCC
CTCACCCTGG CCATCATTCC CAGCCAGATC ATCTCGGTCT CTACTGAAAA GTATGCCATT
CCCCAGGTCA ACCTGGACGA ACTACTGCGG ATTCCCGCTG ACCAGGTAAA AAACCGGATT
GAAAAGGTGG GGGACGCCCC GGTGGTCCGG CTGCGGGGAC GGCTGCTGCC CCTGGTGGAT
CTGGCCGAGG TACTGGGCAT TGAAAAAACC TATGTACACC CTGAAAACGG CCTGGAGTAC
AGTGAGCGGC GCCAGAATGT GGCGGACCGC CGGTCCCGGC AGCATCTGGC GGAGACCGAA
ACAGAGGATG CAGCGCCGGC ACCCGCCAAG GAGACACGAA GCCAGTCCGG GGAACGGATC
CCGGCCAGCC GTCGGAAAGC CGAAGACCGG CGGTTTCATG CCACCAGCGC CGTCAACATC
GCGGTGGTGT TTCAGGGCAA CACCCGCTAC GGCCTGATCG TGGACCGGCT GCTGGATTCC
GAGGAGATCG TGGTCAAGCC CCTGGGCCGG CATTTCAAGC AGTGCCAGGA GTACAGCGGC
GCCACCATCA TGGGGGACGG CCGGGTATCG CTGATCCTGG ATGTGGCGGG TGTCGCCCAG
TCTGCCCGGT TAAAATCCCT GGAGCTGTCG GAAAAAGCCC AGCAGCGGGC CGCCGAGGAA
AAAGCCGCGG CCACGGCATC GGACCAGACC AAAGCCTCCC TGCTCATGTT TGCCAACGGT
CCGGACGAAC AGTTTGCCGT CTCCCTGAGC CTGGTGGAGC GCATTGAGAG CATCAACCCG
ACGGCCATCG AGCATGTCGG AGGGAAAAGA ATCATTCAAT ACCGGGGCGG GGCACTGCCC
CTCTTTTCCT TGAGCGAAGT GGCCGCTGTC AGCCCTCTGC CCGAATCCGG AGAGATTGCG
GTGATCGTCT TCAGCCTTGG CGGCAAGGAG ATCGGCCTGA TGGTGGCCCC GCCGGTGGAT
GCCATTGAAG TACCCATCAC CATTGATTCC AAGGCCCTCA AGCAGCCCGG CATCATCGGG
TCGGCCATTA TTCACAACCA TACCACCCTG CTGGTGGATG TGTTTGAGGC GGTCAAGACC
GTTTATCCCG ACTGGGTCGC GGGCGGCAAA GCCCCCGGCC GCCCCGTGGC CGAGGGAAAC
AAGGCAACGC TCCTGTTTGC CGAAGATTCC GATTTCTTCA GAAAGCAGGT CAGGGGATTC
CTGGAAGAGG ACGGCTATAC GGTGCTGGAA GCCGCCAACG GCCAGGCGGC GTGGGAACTC
CTTGACACCA CCGACCAGAC GGTAGACCTG GTGATCACGG ACATCGAAAT GCCGGTGATG
GACGGATTTG AACTGACCCA GAAAATCAAA AGCGACAACC GGTTCCGTCA CCTCTCCGTG
CTGGCGCTGA CCTCTCTTGC CGGTGAGGAG GATATTGTCC GGGGCAAGCA GATCGGCATC
ACCGACTACC ACATTAAAAT GGACCGGGAA AAACTGCTGG ACACTGTCAA ACGGCAGTTG
GCGGCTGACG CCGGTTGA
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| Protein sequence | MLIEDEESLQ MYVEESLDHM ANIENNLLAI EKGGDSADPE IVNEVFRAAH SIKGGAGLMG
LNNIKELSHR VESVLGMIRE KKITPDASII SIVLSAFDKL YEMVTHIRES ETIDISEEVV
SLTGLTTASL PAARKPDVTK MINILPPDGG PALFQISRLD LDKARKGGRD LYLIEWDLIQ
DIHEQERSLM EMMKSVSMSG DVLDITMKIE AVGTLEEGTP SRIPILMLYS SRIGDDILPS
LFNVERHQVH RVTEAMMVPA EADKPTPVRP DAGMPETAQS FTTETTPAPE ATMPDVADED
RPAALDTTDT VYADEDDGLT IDSLKGPHVK AALSQTSLRV DVKLLDNLMT LAGEMVLSRN
QLIQSLTAQN AKTIASAAQR INMVTSELQD VIMRTRMQSI GTIFNKFPRL VRDMSQTLGK
KVELTIEGTD VELDKTIIEA ISEPLVHLVR NSVDHGIEPP GKRAQLGKSP IGRIHLAALH
EAGQVSIEIT DDGNGIDDQL IVATALRKGL IAERRVADMS RKEKTELILL PGFSTSDKVT
DVSGRGVGMD VVKTNLEKLS GTMDIDSVPG KYTTISIKLP LTLAIIPSQI ISVSTEKYAI
PQVNLDELLR IPADQVKNRI EKVGDAPVVR LRGRLLPLVD LAEVLGIEKT YVHPENGLEY
SERRQNVADR RSRQHLAETE TEDAAPAPAK ETRSQSGERI PASRRKAEDR RFHATSAVNI
AVVFQGNTRY GLIVDRLLDS EEIVVKPLGR HFKQCQEYSG ATIMGDGRVS LILDVAGVAQ
SARLKSLELS EKAQQRAAEE KAAATASDQT KASLLMFANG PDEQFAVSLS LVERIESINP
TAIEHVGGKR IIQYRGGALP LFSLSEVAAV SPLPESGEIA VIVFSLGGKE IGLMVAPPVD
AIEVPITIDS KALKQPGIIG SAIIHNHTTL LVDVFEAVKT VYPDWVAGGK APGRPVAEGN
KATLLFAEDS DFFRKQVRGF LEEDGYTVLE AANGQAAWEL LDTTDQTVDL VITDIEMPVM
DGFELTQKIK SDNRFRHLSV LALTSLAGEE DIVRGKQIGI TDYHIKMDRE KLLDTVKRQL
AADAG
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