| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0944 |
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| Symbol | |
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| ID | 5693779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1102025 |
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| End bp | 1103041 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641263541 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001528831 |
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| Protein GI | 158520961 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000124721 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCAT ATTTTATTCG ACGATTCCTG CTGATCATTC CCACCTTTCT GGGCATCACC
GTACTGGTGT TCGCGGTCAC GCGGTTTGTG CCCGGCGGCC CGGTGGAACG CATGATTGCC
GAGTCCTACC GCATGCAGGC CATGGAGGGC CGCACCCAGC GGGAGGCCAC CCAGCCCCTC
TCCGAAGAGC AGATCAATTA CCTGAAACGC TATTACGGGT TCGACAAACC GGTGCCGGCA
GCCTATGTGC TCTGGATGGG AAAAGTTCTG TCCGGCGACC TGGGCACCTC CACCCGGTAT
TATGACCCGG TATGGGAGAT GATCCGGTCC CGCATACCCA TATCGCTCTA TTTCGGCCTG
CTCTCTATGG TCATTATATA CGGGGTCTGC ATTCCCCTTG GCATGGCCAA GGCCGTGCGC
CACAAAAGCG GGTTCGACAA CTTCACCTCC GTAGCGGTGT TTGCCGGCTA CGCCGTGCCC
GGCTGGGTCC TGGGCATTCT GCTGCTGCTG CTCTTTTCTT CCCGGTGGGG GGTGCTGCCC
CTGGGCGGGC TCACAAGCGC CGGCTTTGAC GCCCTGTCCG GACCTGAAAA AATTCTCGAT
ATCGCCCGGC ACACGGTCCT GCCCCTGGCC GCCTACGTTG TGGGCTCCTT TGCCGTAATG
ACCTTTTTAA TGAAAAACAC CCTGATGGAC GAACTGGCCG CCGACTATGT GCGCACGGCC
ATGGCAAAAG GGCTGTCATT TAAAAAAGCG GTGTTCGGCC ATGCCTTAAG AAACAGCCTG
ATTCCCGTTG CCACCAGCTT CGGCAACAAC ATATCGGTCC TGGTCTCGGG CTCGTTTCTC
ATTGAAACGG TCTTCAACAT CAACGGCATG GGCCTTTTGG GCTACGAGTC GGTGGTGGAG
CGGGACTATC CCGTGGTCAT GGGCATTCTG GTGATCTCGT CGCTGCTGTT TTTAATCGGC
AACATTCTTT CCGATATCTG CGTGGCCTTT GTGGACCCGC GGGTGAGATT CCAGTAA
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| Protein sequence | MRAYFIRRFL LIIPTFLGIT VLVFAVTRFV PGGPVERMIA ESYRMQAMEG RTQREATQPL
SEEQINYLKR YYGFDKPVPA AYVLWMGKVL SGDLGTSTRY YDPVWEMIRS RIPISLYFGL
LSMVIIYGVC IPLGMAKAVR HKSGFDNFTS VAVFAGYAVP GWVLGILLLL LFSSRWGVLP
LGGLTSAGFD ALSGPEKILD IARHTVLPLA AYVVGSFAVM TFLMKNTLMD ELAADYVRTA
MAKGLSFKKA VFGHALRNSL IPVATSFGNN ISVLVSGSFL IETVFNINGM GLLGYESVVE
RDYPVVMGIL VISSLLFLIG NILSDICVAF VDPRVRFQ
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