Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0938 |
Symbol | |
ID | 5693773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1094286 |
End bp | 1095671 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641263535 |
Product | putative RNA methylase |
Protein accession | YP_001528825 |
Protein GI | 158520955 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1041] Predicted DNA modification methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000152524 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCTCAG GAGAAAACTT GGATCCGCAT AAAATCCCCG ACGTACTTGC ACAAGACTTC TTTGGAAAAC TATTCTCTAC CAAATATCAA CTCATACCTA ACTTAAATGA CCTCTACGAA TTAGAACTTG CCTTCTACGA ACAACAGGTG TTGTCTGACG AAGAGCTTCT TAGAAACAGC GCCTATTTTG CGCGTGTGTG TAACAATTTC ACACGACACT TTCTCATATG CACCGGCGAT TCACTGAAGT TAGCTGATCA TTCTTCATCT AGGCTCAAAT CCTTTTTCGA GAGGAATCTC TTCAGAACCG GCTACAGCAC CCATGGTCTT TTTCCTTATC GCGGAAAATT TCATCCCCAG ATGATAAAGG GGTTAATAAA TATTATGGGA CTGAAACCTG GAGATACGGT CTTGGACCCT ATGATGGGTT CAGGCACGGT CTTGGTTGAG GCCTCTTTGA TGGGGATAAA TTCAATCGGC ATTGATGCAA GCCCTTTTTG CAGGTTTATG GCTCAAACAA AAATAGATGC TCTAACAGTC CCTTTGAGTC GAGCCCAGAA AACTCTGAAT AATTACAAAG AAGTGTTTAA TTATTTTTCG GAACGTGTAG GAAAACCTGT GGCAGGAATC AGAGCCTGTA AAAGAAAATC ACAAAAAAAT GTGATGTCTG TCATGGAGCC TGTCGCAGAA TATGTGATCA AGGAAGATCG TAGTCGTCTC ACAAAACAGC AAAAAGAGAC TTCAGACACA TACAATTTCC TCTTATTGGC CTACTTAGAC AGTGTGGGGT ATTCTGAAAG AAGTAGCCGA AGGTCTCCCA TTGAACAGTT CAAAGCGATA TTGGAAAGAT ACCTATTTGT TGTCGAAAAA ATTCAGAAGG GCTTAATCGA CACGGGGTTG GAGCTGTCGG CAACAACGGC AATGGAGGGA GATGCAAGAG ACCTACCACT TGATAACAAA ACTGTCGATG GTATCATTTT TTCACCCCCT TATAGCTTTG CCATTGATTA TCTGGGAAAT GACGCCTTTC ATCTCAACTA CCTAGGCGTA GAAATGGACA ACCTCAGGAA TTCGATGATT GGTTTGAGGG GGAAAAAACT TTCAGAAAAA TTTGAACTCT ACCGAGAAGA TATGGAACAA GTCCTTTCAG AATGTTCCCG AGTTTTACGT CCGGCAAGAC TATGCACCAT TATTGTTGGG ACCAACAACA ATCAACTCGG AAAAGCATTG GGGGTGGACC CGAACAAAGT CCAAGGAATA CATGAAATAC TGGTACAGAT AGGCAAAAAA TATGGTTTCC GACTTATCAA AATGATGAGC CGCCCTATTA TAGGAATTTC AAATACTATG CGGCTCGAAT ATATTGCGAT ACTACAACGG AGTTAA
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Protein sequence | MSSGENLDPH KIPDVLAQDF FGKLFSTKYQ LIPNLNDLYE LELAFYEQQV LSDEELLRNS AYFARVCNNF TRHFLICTGD SLKLADHSSS RLKSFFERNL FRTGYSTHGL FPYRGKFHPQ MIKGLINIMG LKPGDTVLDP MMGSGTVLVE ASLMGINSIG IDASPFCRFM AQTKIDALTV PLSRAQKTLN NYKEVFNYFS ERVGKPVAGI RACKRKSQKN VMSVMEPVAE YVIKEDRSRL TKQQKETSDT YNFLLLAYLD SVGYSERSSR RSPIEQFKAI LERYLFVVEK IQKGLIDTGL ELSATTAMEG DARDLPLDNK TVDGIIFSPP YSFAIDYLGN DAFHLNYLGV EMDNLRNSMI GLRGKKLSEK FELYREDMEQ VLSECSRVLR PARLCTIIVG TNNNQLGKAL GVDPNKVQGI HEILVQIGKK YGFRLIKMMS RPIIGISNTM RLEYIAILQR S
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