Gene Dole_0924 details

Gene Information

• Locus tag: Dole_0924
• ID: 5693759
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1079043
• End bp: 1079483
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641263521
• Product: nucleic acid binding protein
• Protein accession: YP_001528811
• Protein GI: 158520941
• COG category: [R] General function prediction only
• COG ID: [COG1569] Predicted nucleic acid-binding protein, contains PIN domain
• TIGRFAM ID: [TIGR00305] probable toxin-antitoxin system toxin component, PIN family

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.269416
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCG TGCTTGATAC AAACGTGCTG GTTTCCGGGC TTCTTACACC GTATGGGCCA 
AACGGCGAGA TCATCCGCCT GATTTCGGCC GGCGTGCTTA CGGTTCAATA TGATTCAAGG 
ATATTTCTTG AATACCAGGA TGTCCTGGCG AGACCCAGGT TCCAATTTGA TATGCAGGAT 
GTGAACACCT TTCTGGCCTG GTTGAAACAA ACGGGCCAGG TGGTTTTCGG CGCGCCACTG 
GGAAAAAGGC TGCCGGATCC GGATGATGAG CCCTTTCTTG AGGTTGCCAT TGCCGGGCAG 
GCGGTATGCA TAATAACAGG GAACAAAAAA CATTTTCCCA AAGCGGTTCG GCAGAATGTC 
ACCATATTTT CGCCTGCTGA ATTTATCGAG TTTTTCAGAA AACATAATGA GGGCACAGGG 
CAGGCCCATC CCCAGGGGTG A 

 

Protein sequence

MKIVLDTNVL VSGLLTPYGP NGEIIRLISA GVLTVQYDSR IFLEYQDVLA RPRFQFDMQD 
VNTFLAWLKQ TGQVVFGAPL GKRLPDPDDE PFLEVAIAGQ AVCIITGNKK HFPKAVRQNV 
TIFSPAEFIE FFRKHNEGTG QAHPQG