Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0901 |
Symbol | |
ID | 5693736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1052085 |
End bp | 1054103 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641263498 |
Product | ATP-dependent OLD family endonuclease |
Protein accession | YP_001528788 |
Protein GI | 158520918 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTTA AAAAAGCCAG AGTTCAAAAT TACCGAAGCA TCATAGACTC CGGTCTATTT GATATCGAAA AATTAAAGAC AATATTAGTC GGCCCAAATG AAGCTGGCAA AACAGTTCTC CTTAAAGCGC TACAACAGCT TAGCAAGCCA AGTGATGTCG AAGGATTTGA TGTATTACGC GATTATCCAA GGTCAAAATA CAACGACATT ACTACTGGAA TTGTTGATCC ATCAACGGTA ACCGTAGTAA CTGGTTATTT TGAATTAGAG GATGAAGACA AAGAGTTAAT TCCAGAATCA TTTCATAATT GCCAGTATAA ATTATATAGA AATCTCAACA ATAAAGGCTA TCACAGTCTA ATAAATGCAC CTGAAAAAAT TACATTTGGA GTTTTAAAAA AGAATTTTTC CAGAATGATT ACACACATGG ATAAGCAAGT CGTTCCTGTG GAAGGTGATA AGGAAGTTAT AAAACCTAGT GATTCATTTA AAGCAATATC GTCAGAATGG AGCGATAATA AAATAATAGA TGACGAATCT GCCAAGTCAT TAAAATCTTG GTTAGATGAA AATTATGAGT ATGTAGAAGA AGAAAATGAA AAAGAAGAAT CACGACACGC AGAATTGCTT GAATTAATTC AAAATAACGC AAAACACGAT GAAGTATTAA AAATATTGGA CAAAAGAACG CCTGTATTCA TTTTATTCAA TAACTACTTT AAAGTTAAGC CATCAGTGCA TTTAGGGCAT TTGGCGCAAA GAGTTGAACA AAATATCCTT GACGACGAGT ATTACGACTA TGGAAATTTA TGCTTATTGA AACTGTTGGG ATTTACTCCA AAAGAATTAG CAGATTTGGG TAATGCTCAA AGCCCGAAAA TCAATGAAAA GGAGGCTTTA AAAGAATATA AGGACAAGCT GGACAAAAGA AGTTATCAAC TAAATGCTGC AAGCGTAAGG TTAACGAATG AAATTTGTTC AGCATGGTTG CCGGACTTAA AAAGATCAGA AGCAGATAAA CTTAAGATAA CAGCAGATGG GCAATATTTA AAAGTCGTTG TTGAAGATGA TCTTGGTGTC GATATCGAGT TAGATCAAAG ATCAGAAGGG TTTCAGTGGT TAGTATCTTT TTTCGTAGTG TTTTTCTCTG AAGCCATGGA TAAACATGAC AACGCAATAT TGTTATTGGA TGAGCCAGGA ATGAGTTTAC ATGGTCTAAA ACAAAGAGAG TTCAGAAAAA CTATTTCGAG GCTTGCAGAA AAAAACCAAA CTATTTTTAC CACACACTCA CCATTCTTGG TGGGTCCTGA AGAGCTTGAC ATTGTTCGTG TTGTTGAACT TGAAAACAGA ACAGTTGGGA CAATAGTCCA CACAACAATT TCTTCTAGCG ACCCAGCTGG ATTGTTGCCG CTCCAGGAAG CACTCGGTTA CGATCTCGCT AATAGTTTGT TTTCACAGCA AAGAAATTTG ATTTTGGAAG GCATTACTGA CTATTGGTAC CTTGAAGCAA CTTCTGAATT ACTGAAAGAA GCAAAAATAT GTATCTTAAA TGACAAAATA GCTTTGGTTT TTGCCAACTC CGCAGGGAAG GTCGTATATT ACGCCACTAT TTTGCATGCA CATCATCTTA AAGTCGCTGC ACTTTTAGAT TCTGACGCAG CTGGTGACCA AGCTGCACAA CAAGAAAACC TCGTACATGC TTTAGGGAAT AAAAACATAC TCAGAACAAA AGATTTCTGT AATGGAGTTT CAAAGCCTGA GATTGAAGAT ATGCTTCGGG AAACACTCAT CTTAATTGTA AAAGAAGAGT TTGGCAAAGA CACCTCAAAA ATTGCACAAA AACAACCAAC AAGGCCAATA ATCGACTTGT TTGCAGATGA AGTAAAAGAT TTCTCTAAGT ATAGATTAGC AAAATCATAT GTCCGCTGGA CAAGAAACCA TGACGCAAAA GATTTAACCA AAGACGAACA ACAAAATTGG AAAACTTTGA TTGAAAACAT TAATAAGGCT CTAAAATAA
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Protein sequence | MRLKKARVQN YRSIIDSGLF DIEKLKTILV GPNEAGKTVL LKALQQLSKP SDVEGFDVLR DYPRSKYNDI TTGIVDPSTV TVVTGYFELE DEDKELIPES FHNCQYKLYR NLNNKGYHSL INAPEKITFG VLKKNFSRMI THMDKQVVPV EGDKEVIKPS DSFKAISSEW SDNKIIDDES AKSLKSWLDE NYEYVEEENE KEESRHAELL ELIQNNAKHD EVLKILDKRT PVFILFNNYF KVKPSVHLGH LAQRVEQNIL DDEYYDYGNL CLLKLLGFTP KELADLGNAQ SPKINEKEAL KEYKDKLDKR SYQLNAASVR LTNEICSAWL PDLKRSEADK LKITADGQYL KVVVEDDLGV DIELDQRSEG FQWLVSFFVV FFSEAMDKHD NAILLLDEPG MSLHGLKQRE FRKTISRLAE KNQTIFTTHS PFLVGPEELD IVRVVELENR TVGTIVHTTI SSSDPAGLLP LQEALGYDLA NSLFSQQRNL ILEGITDYWY LEATSELLKE AKICILNDKI ALVFANSAGK VVYYATILHA HHLKVAALLD SDAAGDQAAQ QENLVHALGN KNILRTKDFC NGVSKPEIED MLRETLILIV KEEFGKDTSK IAQKQPTRPI IDLFADEVKD FSKYRLAKSY VRWTRNHDAK DLTKDEQQNW KTLIENINKA LK
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