Gene Dole_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0816 
Symbol 
ID5693651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp943234 
End bp943899 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content54% 
IMG OID641263413 
ProductTetR family transcriptional regulator 
Protein accessionYP_001528703 
Protein GI158520833 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ATCACCACAA ACCGACCCGC CAGTACGGCG GTGTGGACGC GGACCAGCGG 
ATGCATGAAC GGCGGGAGAA ATTCGTTGCC GCCGGCCTGG AATCGTTCGG TACCCTGGGA 
TACGGACAGG CAACGATCAG GGGCATCTGC CAGCTGGCCG GGCTGACCGA ACGCTACTTT 
TATGAATCAT TTAACAACAA AGAGGACCTG CTGTGCGCGG TATTCAACCG GTTGATCAGT 
GAACTGGAAG CCGGGGCGCA GATGATTATT GAAACGCCCG GGACCAAACC GGAAGAAGCG 
GCCTGCCAGA TCACAAAAAG CTTTTACCTG CTGTTTTTAC AGGATCCCCG CCGGGCCCGG 
GTGCAACTGT TTGAGGTACT TGGCGTCAGC CCCCGGGTGG ACGAAGAATA CCGGGAATCG 
ATAAAAACCC TGGCCGGCTG GATCAAAATC ATTTTTTGTT CCCTTTTTCC CTCCCTGGAG 
CCCGAATGGC TGGAAACGAC AATCATTCCC ACATCAATCT CCGGCGCCAT GATCGCCAAT 
GCCCACCAAT GGGTCCTGGA TGGTTTTCAG ACCCCGGTTG ACGATATTGT ATCCCAATCG 
ATGGAAATGT TCATGGCCAT CGGCAACCAT TACCAGAACC TGCACCAGCA CCGGTCGGAA 
AAATAA
 
Protein sequence
MKENHHKPTR QYGGVDADQR MHERREKFVA AGLESFGTLG YGQATIRGIC QLAGLTERYF 
YESFNNKEDL LCAVFNRLIS ELEAGAQMII ETPGTKPEEA ACQITKSFYL LFLQDPRRAR 
VQLFEVLGVS PRVDEEYRES IKTLAGWIKI IFCSLFPSLE PEWLETTIIP TSISGAMIAN 
AHQWVLDGFQ TPVDDIVSQS MEMFMAIGNH YQNLHQHRSE K