Gene Dole_0708 details

Gene Information

• Locus tag: Dole_0708
• Symbol: rplC
• ID: 5693543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 840738
• End bp: 841364
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641263305
• Product: 50S ribosomal protein L3
• Protein accession: YP_001528595
• Protein GI: 158520725
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00455924
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCAGAG GAATTATTGG ACGAAAGATA GGAATGACAG GGGTCTTTTC CGACCAGGGA 
GAGTATGTCC CGGTTACGGT GATTGAAGCC GGCCCCTGCG TGGTGACCCA GATCAAGACT 
GTTGAAACCG ACGGCTACAG CGCCCTTCAG CTGGGGTTTT TGGAAAAAAA GGCCAGCAAG 
ATCAACAAGC CGCTGGCCGG CCATTTCAAA AAGAGCGGCG GTGTGGGGTT TGCCTACGTC 
AGGGAAATGG CGGTGGACGA TCCTTCCGCG TATACCCTGG GCCAGGTGAT CAACGCCGAA 
CTGTTTTCAG CCGGAGAGAA GGTGCATGTG GCCGGACTGA TGAAGGGGCG TGGTTTTGCC 
GGTGTTGTAA AACGGCACGG ATTTGCCGGC GGCAAGGATA CCCACGGCTG CCACAGCCAC 
AGGGTACCCG GTTCCATCGG CACCAGCGCC TGGCCCAGTA AGGTATTCAA GGGCAGGAAG 
CTGCCCGGCC GTTACGGCAA TACACGCATT ACGACCAAAA ATTTGAAAAT ATTTGATATT 
CAACCGGAAA CCAACCTGAT CCTGATCAAG GGCGCGGTTC CCGGCAGCAA CAACGGACTG 
GTGGAGATTC GGAAAATCAA CGCCTGA 

 

Protein sequence

MCRGIIGRKI GMTGVFSDQG EYVPVTVIEA GPCVVTQIKT VETDGYSALQ LGFLEKKASK 
INKPLAGHFK KSGGVGFAYV REMAVDDPSA YTLGQVINAE LFSAGEKVHV AGLMKGRGFA 
GVVKRHGFAG GKDTHGCHSH RVPGSIGTSA WPSKVFKGRK LPGRYGNTRI TTKNLKIFDI 
QPETNLILIK GAVPGSNNGL VEIRKINA