| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0521 |
|---|
| Symbol | |
|---|
| ID | 5693343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 587942 |
|---|
| End bp | 588670 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641263105 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001528408 |
|---|
| Protein GI | 158520538 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCGC TTATTCTGGC GGGGGGCAGG GGAAACCGCA TCAACGAGTT TTCCGAAAAC
AGGAATAAGT GCATGGCCCT GCTCAAGGGC CGGCCCCTGC TGGAGCATGT GCTTTTGCGC
ATGGCCCCCG AAGACCTGTC CGAGCTTGTG GTGGTGGTCG GCTATAAGGC CACGGAGATT
ATCAATCACT TCGGCATTCG CTATCAGGAC AAGCGTATCC GGTATGTGCT GCAGAAGGAG
CAGAAGGGCC TGGTGCATGC CATGGGGTGC GCGAAAGCGG CACTGGAAGG GGAAGATTTT
TTTCTGGCCC TGGGCGATGA AGTGCTGACC AGCGACCGGT GCAGTGATAT GATTCGAATG
TTTAAAGGTG ATCCGAACCC CTTCGGCGTG TGCGGTATCG TGAAAGTGGA AAATTGCGAC
CAGATTCGCA AAACTTATGC TGTTGTAAAG GATGAGCAGA ACCGGATATT TCGGCTCATC
GAAAAACCGA TTCGGCCCAT TAACGATTTT CAGGGCACCG GCCATTGCAT TTTTAATAAC
CGGATTCTGG ACTATATTGA TATAACGCCT TTTCATCATG AACGCCGGGA AAAAGAGTTG
CCGGACCTGG TGCAGTGCAG TATTGATGAC GGCAAAACCG TTCGTGCGTT TCCGGTGTGC
GACCGGTACG TGAACATCAA TTCCGTGGAA GATCTGGATG TGGCGGAATC CCTATTGAAA
GATGAATAA
|
|---|
| Protein sequence | MKALILAGGR GNRINEFSEN RNKCMALLKG RPLLEHVLLR MAPEDLSELV VVVGYKATEI
INHFGIRYQD KRIRYVLQKE QKGLVHAMGC AKAALEGEDF FLALGDEVLT SDRCSDMIRM
FKGDPNPFGV CGIVKVENCD QIRKTYAVVK DEQNRIFRLI EKPIRPINDF QGTGHCIFNN
RILDYIDITP FHHERREKEL PDLVQCSIDD GKTVRAFPVC DRYVNINSVE DLDVAESLLK
DE
|
|---|
| |