Gene Dole_0428 details

Gene Information

• Locus tag: Dole_0428
• ID: 5693247
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 493970
• End bp: 494632
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641263009
• Product: peptidoglycan-binding LysM
• Protein accession: YP_001528315
• Protein GI: 158520445
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0428] Predicted divalent heavy-metal cations transporter

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTCGCCG AGTGGCTGCG GCCGTCGAAA AAAATGCTCA ATCACGCCCT GCATGCCGCC 
ACCGGAATTA TCCTCGCAGT CGTTGCGGTC GAAGTAATGC CGGCTGCACT TGCCGGCGCG 
CCGGCCTGGT TGCTCGCCCT GGCTTTCATG GGAGGTGGCG GCACTTACCT GCTCATAGAA 
TCCGGTGTCA AACGATGGCA GGAGGGCAAA CAAGCCGGAG CAGGGGCTGG GGCATGGATG 
GTCTATCTGG CGGTGGCAAC CGATCTTGTC GGTGATGGAC TGCTCATCGG CACAGGATCA 
GCAGTATCGA GCCAAATGGC GCTCATTCTG GCCTTGGGCC AGGTATTGGC GGATATTCCC 
GAAGGTTTCG CTACGATTGC CAACTTTCGG GATAAGGGCG TGGGACGGGT CAAACGGCTG 
CTCATTTCCG CCTCGTTTCT CTTGCCGGTC ATAGGCGCCG CTGCTCTTGC GTACTTCGCG 
TTTCGAGGGC GGAGTGAAGT GTTGAAGATG GCCGGTCTGG TCTTTGTGGC CGGCTTGTAC 
ATGCTTGCCG CCATGGAGGA TATGATGCGC GAGGCCCATG AGAGTGCCGA AGATAGCCCT 
TGGTCCGCTC TCAGTCTTCT TGCGGGCTTC ACGATTTTCC TGGTCATCTC GGGATCGCTT 
TGA 

 

Protein sequence

MLAEWLRPSK KMLNHALHAA TGIILAVVAV EVMPAALAGA PAWLLALAFM GGGGTYLLIE 
SGVKRWQEGK QAGAGAGAWM VYLAVATDLV GDGLLIGTGS AVSSQMALIL ALGQVLADIP 
EGFATIANFR DKGVGRVKRL LISASFLLPV IGAAALAYFA FRGRSEVLKM AGLVFVAGLY 
MLAAMEDMMR EAHESAEDSP WSALSLLAGF TIFLVISGSL