| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0404 |
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| Symbol | |
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| ID | 5693223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 464425 |
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| End bp | 465897 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641262985 |
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| Product | methyltransferase GidB |
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| Protein accession | YP_001528291 |
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| Protein GI | 158520421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
[COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCCG TAAAAAAACA GCGCACCTCC GCAGGAGAAA GCCGGCACAC GCAGCGGGAG
ATGGCCCGCC TGCTTGCGCG GTCGGGCATC GTGCTTTCCG ATGCCGGCTT AAAGCAGCTA
TGGTCATACC ACTGTTTGCT GCGCAAACAC AACCCTGAGT TGAACCTCAC CCGCATTCAC
AATTTTGAAA ACATGGTGCT AAAGCTCTAC GTGGATTCCA TCCTGCCCGG CACACTGGTC
GATCTGCCCT CCCCTCTGCT GGACCTTGGC ACCGGCCCGG GCATGCCCGG TATTCCGCTG
AAAATAGCCT TTCCGGAGCT AACCGTGCTG CTGGCCGAAG GCCGGGGCAA GCGGGTGGCG
TTTCTCAACA CCGCTGTTCA GGAACTGGGC CTTTACGGTG TTTCAGTGAT CGGCCGGGCC
ATTGCCCCGG ACTTTCAGGA GCCGGTGGCC GGCGTGATCA CCCGGGCCGT GGAGGCCATG
GCCGCCACCC TGGAGCGGGT TGATGGCTGT CTTTCCTCGG GCGGCAAAAT CTTTTTCATG
AAAGGCCCTT CCTGCGACGA CGAGATTGCC GATGCACAGG CAAAGTTTGG CGCCCGGTTT
CGGCTGACGG ATGATATAGC CTACTCCATT GCCCACACTC CCCACCGGCG GCGGCTGGTG
ATATTTGAAC GCCTGGACGC CTCCCGGCGC CAGCAAAAGG CGGCGGCCAT GAACAGACAC
AGGGTGCATG TGATTGAAAG CGAAAACAAT GCCCGGTTCA AGGAGTTAAA AAAACTGCTG
GGGGGCCGGG GCGTAAAAAA ACAAAACCTG GCCCTGGTTG CCGGGGTAAA GCCGGTAACC
GAGGCCCTGG CCGCCTTTCC CGATCAGTGC CGGGCCTGGA TCACCCGGCA GGACCAGACG
CCGCCGCCGG AAAACGCCCC GTCCCATCTT GCCTGGGAGC AGCTGGCCCC GGCCCTGTTT
GAAGCCCTGG ATGTTTTCGG CACCCGCGCC CCCCTGCTGC TGTTTGAACC CTCGTCCATG
GGGGTCTGGC GGCCGGACGA AGGATTTTCA CCGGGCTGCA CCCTGCTGTT GCCTTTTCAG
GACCCGGAAA ACGCCGGGGC CGCCATTCGT TCAGCCGTTG CCTTTGGCGC GGCAAAAATC
GTGCTTTTGT CCGAGTGCGC CCACCCCTTT CATCCCAAAA CCATTCGGGC CTCAGCCGGG
GCCGTGCTGC ACGCCCCCCT GTTTGAAGGC CCGTCGTTAA AGGACCTGCC CGAGGACCTG
CCCATTGTGC CCCTCTCCAT GGAGGGGGCT CCCATCACCG GGTTTTCCTT CCCCGCCGCC
TTCGGCCTGC TGGCCGGCAT CGAGGGGCCC GGTCTGCCCG ATGCGTGGCG CAGCCGGGCG
GTGTCGATTC CGGTCACCGG CGCCGTGGAA TCACTGAACG CGGCCACCGC CATTGCCGTT
GCCCTGTATG CGTGGTCCCA GGCGGGAAAA TAA
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| Protein sequence | MAAVKKQRTS AGESRHTQRE MARLLARSGI VLSDAGLKQL WSYHCLLRKH NPELNLTRIH
NFENMVLKLY VDSILPGTLV DLPSPLLDLG TGPGMPGIPL KIAFPELTVL LAEGRGKRVA
FLNTAVQELG LYGVSVIGRA IAPDFQEPVA GVITRAVEAM AATLERVDGC LSSGGKIFFM
KGPSCDDEIA DAQAKFGARF RLTDDIAYSI AHTPHRRRLV IFERLDASRR QQKAAAMNRH
RVHVIESENN ARFKELKKLL GGRGVKKQNL ALVAGVKPVT EALAAFPDQC RAWITRQDQT
PPPENAPSHL AWEQLAPALF EALDVFGTRA PLLLFEPSSM GVWRPDEGFS PGCTLLLPFQ
DPENAGAAIR SAVAFGAAKI VLLSECAHPF HPKTIRASAG AVLHAPLFEG PSLKDLPEDL
PIVPLSMEGA PITGFSFPAA FGLLAGIEGP GLPDAWRSRA VSIPVTGAVE SLNAATAIAV
ALYAWSQAGK
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