Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0401 |
Symbol | |
ID | 5693220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 462093 |
End bp | 462866 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641262982 |
Product | ABC transporter-related protein |
Protein accession | YP_001528288 |
Protein GI | 158520418 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCA TCGTGGATAT GCACAACGTT TCATTTACCT ATGGCGGTCC GGCCGTGATA GAAAACGTCA CCCTGTCCGT ATCCGAAGGG GAGTTCGTGG CCCTGATCGG GCCCAACGGC GGGGGCAAGA CCACGCTGCT CAAGCTGATG CTGGGCCTGG TCAAACCGCA AAAAGGAACC GTTCGGGTGC TGGGCCGGCC CCCTGAAAAG GCATCCCACC ATATCGGATA CGTGCCCCAG GACATTCACT TAAACCTTGC ATTCCCCGTC ACTGCCCTGG ACGTGGTGCT GATGGGAAAG CTTGCACCCG GCAAACGGTG GATCGGCCGA CCGGCCCGTC ACAAAACCGA CGCCCTGGCC GCCCTGGCGC AGATGGGCAT GGAGGCCAGC GCGCATACCC GCATCGGAGA GCTTTCCGGG GGCCAGCGCC AGCGGGTTTT TATCGCCCGG GCCCTGGTCA CCCAACCGAA ACTGCTGCTG CTGGACGAAC CCACGGCCAG CATCGACACC AGGGGCCAGG CCGACTTTCT GGAATTGCTG CATGATCTGA ATCAACAGGT CACCATCGTG ATGGTAAGCC ACGACCTTCT GGCCATCTCG CACCATGTGA CCTCGGTGGC CTGCGTCAAC CGGGGCCTTC ACTACCACCG CCGGTCCGAA CTGGCCGGCA GCCTGATCAA TACGTCGTGC CCCTGCACCG TGGAGTCGCT CTGCCCGGTG GAGATGGTGG CAAGGGAAAC CCCGCACCTT TTTATTCGAA ACCGGAAACC GTGA
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Protein sequence | MTAIVDMHNV SFTYGGPAVI ENVTLSVSEG EFVALIGPNG GGKTTLLKLM LGLVKPQKGT VRVLGRPPEK ASHHIGYVPQ DIHLNLAFPV TALDVVLMGK LAPGKRWIGR PARHKTDALA ALAQMGMEAS AHTRIGELSG GQRQRVFIAR ALVTQPKLLL LDEPTASIDT RGQADFLELL HDLNQQVTIV MVSHDLLAIS HHVTSVACVN RGLHYHRRSE LAGSLINTSC PCTVESLCPV EMVARETPHL FIRNRKP
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