| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0389 |
|---|
| Symbol | |
|---|
| ID | 5693208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 447704 |
|---|
| End bp | 448603 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641262970 |
|---|
| Product | membrane-bound lytic murein transglycosylase B-like protein |
|---|
| Protein accession | YP_001528276 |
|---|
| Protein GI | 158520406 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTT TTTCTTTTAT ATTACAGCTT CTGCTGCCGG CCCTGTTGCT GGGGGTTGCG
GGGTGTACGG CCCCGCCGGC TCCGCCGGTT TATGTCGATT TTGAGACTGC CGCGCCCTTT
GACCGGCTTT GCGCAAAACT GGAAAAAGAC GGGTTTGACG GCCAGGTTCT GCGGCGGTAT
TACACTCATC CGGATGTGGC CTTTGAGCAG GCCGGCACAG CCCTGTTTTT TCACCACAGT
GAATCAAAGC TGAATTACGA CCAGTTTTTA AAAACCGCTT CCCTGAACCG GGCCCGGGAA
TACCTGCAGG CCCAGGGCCG TTGGCTGACA GCGGCCCAGA ACACCTACAC CGTGGACAAA
GAGGTGATAA CCGCCATTCT TCTGGTGGAA ACCCGGTTCG GCGCCTACCT TGGCACCCGG
CCGGCCTTTA ACATTCTCTC TTCCATGGCC TCCCTTGCCG ACCCGGCCAT GGAGGCGGAG
TTCTGGCAGT CCATCGAAAA GACCACGACC TTCACACCAG AGGCCTATAA CAAGCGGGTG
CGGGACAAAT CCAAGTGGGC GTACAACGAA CTCAAGGCGT TTCTGGCCTA TGTGGAAAAA
GAAAACATTG AGAATCCCGT GTCCCTGAAA AGCTCTTATG CAGGGGCCAT GGGAATCTCC
CAGTTCATGC CCAGCAACAT TCTCAAACTG GGCGTGGACG GCGACAATGA CGGCCGGGTA
GACCTGTTCA CCCATCCGGA CGCCATCTTC AGCGTGGCCT CCTTTCTCGC CCACCACGGA
TGGAAACCGG GCCTGGACCA CCAGGCCGCC TACAAGGTCC TGCTCAACTA CAACTACAGC
CGGCCTTACG CCGAAACCGT ATTGAAGATA CGCGAACGGC TCAAGGCCGG ACCCTCCTGA
|
|---|
| Protein sequence | MRFFSFILQL LLPALLLGVA GCTAPPAPPV YVDFETAAPF DRLCAKLEKD GFDGQVLRRY
YTHPDVAFEQ AGTALFFHHS ESKLNYDQFL KTASLNRARE YLQAQGRWLT AAQNTYTVDK
EVITAILLVE TRFGAYLGTR PAFNILSSMA SLADPAMEAE FWQSIEKTTT FTPEAYNKRV
RDKSKWAYNE LKAFLAYVEK ENIENPVSLK SSYAGAMGIS QFMPSNILKL GVDGDNDGRV
DLFTHPDAIF SVASFLAHHG WKPGLDHQAA YKVLLNYNYS RPYAETVLKI RERLKAGPS
|
|---|
| |