| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0358 |
|---|
| Symbol | |
|---|
| ID | 5693177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 410474 |
|---|
| End bp | 411991 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641262939 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001528245 |
|---|
| Protein GI | 158520375 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTTG CCTCCCTGTC CGGCATCCTC TTTACGGTTG CCTTTTCCGT AAAACCGCTC
TGGTGGGTTT CTTTTGCGGC GCTCTTTCCC CTGCTGTTGT CCCTTGACCG GGCAAGAACG
TGGAGAGCTG CTGCTGTCCG GATGTCCCTG TTCTCGATTG TGTTTTCTTT TGGCATGGGC
TACTGGGTGT TCCATGCCCT GGTCGGTCAT TACCAGTTGC CCGCGGGCAC GGCGGTATCT
TTTTTCATTC TGGCGCTGGT CCTTCCGGTC TGGCTGATGC ACCTGACAAT TGCCCTTTTT
TACCGGTTCT TAAACAACCG GACCCCTGTT TTTTATGCCC TGGTGGTGCC ATGCCTGTGG
GTGCTCGGCG ATTATGTTAA AGGCATGATA CCCCTGCTGG TCCCCTGGGG CGACATCGGA
TATGCCCTGG TGGACTGGGG CGCCTATTTT CAGATGGCCG ACCTGGGAGG GGTCTACCTG
GTCTCATTTT TAGTGGTGAT GTTCAACTCC CTGCTGGTCT GCCTGATGGA ATGCCGCCCG
CAAACGAATG ATCTCTTTCG CCGGCGGCCG ATGAAGGGCC GGGCCGGAAC CGCGGTGCTG
ATCCTCCTGG TGCTGATCCT CCTGGTGCCC TTGTGCTACG GGTCCGTTCG GCGTTACCGG
ATGCCTGTCC TGTCTTTGGC CGGGGAGAAG ACGCCTGCCG TCATTGCTCA AGGTAATTTT
TCACACAAAG ACCGATGGGG GGGGCTGGGG TTTTACCAGC GACTGAAAAC CTATATCGAA
CTCAGCGGCG ATCCGTCGGA TATGGGAAAG GCCGGGGTCA TTGTCTGGCC GGAAACCGTG
CTCAATCATC CCGAGGCCCT GACCGGACCG TTTTTTGCGG ACCTGGCCCG GATACTGGGA
AAAGAGAACC TGCTGATCGC CGGCGGGCTG AAGCGTGACA GCCAGAGCCA GGGCGTCTAC
AATTCCGTTT ATGTGATCGA AGACGGTCAG CTGAAACGGT ACGACAAGCA CATCCTTCTG
CCCTACTCGG AAAGAGGACC GGCTGTCGGC CCTTTATTCC GTTTTTACAA CGCCCCGGAC
CGTTTTATTC CCGGCACGAC CCCGGCCTGT CTGAGCACCT CCCATGGCAG GGTGGGGCTG
TCCGTCTGCT TTGAGATCCT CTATCCGGGT TATGTCCGGC TGTCCGTAAA ACAGGGCGCC
GAATTTCTGG TCAATGTCTC CAATGACGCC TGGTTCGGGG ATTCGGCCAT GCCCCGGGCC
CATCTGCGGG CGGCCCGGGC CCGGGCCGTG GAGACCGGCC GCTGGCTGCT GCGGGCGTCA
AACAGCGGCA TTTCCGCCGT GATCGCGCCG AATGGAAGCC TCACTGCCGG CAGTGACCTG
TTTCGCACCC AGCGGATTTC AGGATCGTTT ACGCGTCTGA CGACAACAAC GGTTTACACA
CGATGGGGGG AGTGGCTCTT CTTCTTTTGT CTGGCGGTTC CGGCAATCAG CTTATTACGG
GCGGGTGTCC GGCGTTGA
|
|---|
| Protein sequence | MVLASLSGIL FTVAFSVKPL WWVSFAALFP LLLSLDRART WRAAAVRMSL FSIVFSFGMG
YWVFHALVGH YQLPAGTAVS FFILALVLPV WLMHLTIALF YRFLNNRTPV FYALVVPCLW
VLGDYVKGMI PLLVPWGDIG YALVDWGAYF QMADLGGVYL VSFLVVMFNS LLVCLMECRP
QTNDLFRRRP MKGRAGTAVL ILLVLILLVP LCYGSVRRYR MPVLSLAGEK TPAVIAQGNF
SHKDRWGGLG FYQRLKTYIE LSGDPSDMGK AGVIVWPETV LNHPEALTGP FFADLARILG
KENLLIAGGL KRDSQSQGVY NSVYVIEDGQ LKRYDKHILL PYSERGPAVG PLFRFYNAPD
RFIPGTTPAC LSTSHGRVGL SVCFEILYPG YVRLSVKQGA EFLVNVSNDA WFGDSAMPRA
HLRAARARAV ETGRWLLRAS NSGISAVIAP NGSLTAGSDL FRTQRISGSF TRLTTTTVYT
RWGEWLFFFC LAVPAISLLR AGVRR
|
|---|
| |