| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0353 |
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| Symbol | |
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| ID | 5693172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 404494 |
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| End bp | 405888 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262934 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001528240 |
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| Protein GI | 158520370 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.939472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGACATC TCACCGTTAC CCGGAAACTG GCCTATTCAG GGCCGGCCTT TTCCCTGGCC
GTGGTGGGAA TCCCTGTCTA TGTCTATATT CCGAAATTTT ACACCGACGT GATAGGGGTT
CCCATCGGCG CCCTGGGCCT GATTCTGCTG CTGGTCCGGT TGTTTGACGC CGTTACCGAT
CCGGCCATGG GATATATTTC CGACCGGCTC AAAACCCCCT TTGGCCGGCG CCGGCCCCTG
ATTGCCGCCG GTGCCGTGCT GACCGTGGCC GCCATGGCCC TGCTTTTCAA CCCGCCGGCC
GGCCTGGGAA CCGCGGCGGC AACCGCCTGG TTTGCCGTGA TGGTGGCGGC CCTGTTTCTC
TTCTGGACCG TCATCATTGT CCCGTATGAA TCCCTGGGAC CGGAACTGAC CTATGACTAT
AATGAAAGGA CCGCCCTGTT CGGCATGCGG GACGGCGCGC TGATCGCCGG CACCCTGGTC
GCGGCCGCCT CCCCTGCCAT TGTCAAGGCC CTGTGGCATA TCGGGGAAAC CGCGGAGGAT
TTCCGTGAAG TGTTTCATGT GCTTTCCCTG CTCTACGGCC CCCTGATTCT TGCCAGTGCC
GCCTGGTGCG TCTTGTCTTT CCGGGAACGA ACGACAGTGC GGCCCGAAAC CGCGGCCCCC
TTTTTTTCCG GCATGGCATC CAGCCTGCAA AACAGGCCGT TCCGTATTCT GCTGATCAGT
TATACCATCA GCGCCATCGG CAGCAACCTG CCGGCCACCC TGATCCTTTA TTACGTGGAG
TATGTGCTGC ACTCGCCCAG GGCCGATCTT TTTCTGCTTA TATATTTTGT CACCGGCATC
CTGCTGCTGC CGTTGTGGGT GGCCGGGGCC AAACGGTTTG AAAAAAAGAA CATGTGGCTG
GCCGCCATGG CGGTCAACAC CGGCGCCTTT TTCGGTGTCT TTTTCCTGGG GCCGGGGGAC
GAGTGGGCCT ACGGCGTTCT GGTGGCAATT TCCGGCATGG GGTTCGGCGC CAGCCTGGCC
ATTCCTTCGG CCATGCAGGC GGATGTCATT GATTACGACC AGCTCCAGAC CGGCCTTCGC
CGGGAAGGGG TCTATATCGG GTTCTGGTCC GTGGCAAAAA AGCTGGCCGC GGCCGTTGGG
GTGGGAGCGG GGCTGGCACT TTTGGGTGTT TCCGGGTATG ATCCCACCAT AAACCAATCC
CCGGCCGTGG TGACCACCCT TCGCGTTCTC TATACCCTGG TCCCCTGTTT GTGCAATCTT
GTCGCCATGG CCGTTGCCTG GCGCTATCCG CTGACACGGG AGGTGCATCA GCAGATTCAC
CGGCAGATCC AGCGCCGACT GGCCGGAGAG CCCTTTGTCG ATCCGCTGGC TTCAGCCGGC
AAGGCTTCAG CATAA
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| Protein sequence | MRHLTVTRKL AYSGPAFSLA VVGIPVYVYI PKFYTDVIGV PIGALGLILL LVRLFDAVTD
PAMGYISDRL KTPFGRRRPL IAAGAVLTVA AMALLFNPPA GLGTAAATAW FAVMVAALFL
FWTVIIVPYE SLGPELTYDY NERTALFGMR DGALIAGTLV AAASPAIVKA LWHIGETAED
FREVFHVLSL LYGPLILASA AWCVLSFRER TTVRPETAAP FFSGMASSLQ NRPFRILLIS
YTISAIGSNL PATLILYYVE YVLHSPRADL FLLIYFVTGI LLLPLWVAGA KRFEKKNMWL
AAMAVNTGAF FGVFFLGPGD EWAYGVLVAI SGMGFGASLA IPSAMQADVI DYDQLQTGLR
REGVYIGFWS VAKKLAAAVG VGAGLALLGV SGYDPTINQS PAVVTTLRVL YTLVPCLCNL
VAMAVAWRYP LTREVHQQIH RQIQRRLAGE PFVDPLASAG KASA
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