| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0315 |
|---|
| Symbol | |
|---|
| ID | 5693134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 361148 |
|---|
| End bp | 361930 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641262896 |
|---|
| Product | TatD family hydrolase |
|---|
| Protein accession | YP_001528202 |
|---|
| Protein GI | 158520332 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000203569 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAC TGTTTGACAG CCACTGCCAC CTGGACGACC GGTCTTATGC CGACGACCTG
GACAAGGTGC TGGACCGGGC GCATGTGGCC GGAGTGGCGG CGGCCATGGT GGTGGGCACC
ACCCTGGAAA GCTCAAACCG GGCCGCGGCA CTGGCAGCGC AGCACGAGGG CCTGTTTGCC
TCGGTGGGGG TCCACCCCCA CGACGCGGCC CGGTGCACCG AACACCAGAT CAAAAGCCTG
GGCCGCATCG CCGCGGAAAA CCCCAAAGTC CGGGCCTGGG GTGAAACCGG CCTGGATTTT
AACCGCATGT ACTCCCCTGA AGGCGACCAG GAAAAATGGT TCGAGCGGCA GATCGCGGCG
GCGCAAAAAG CCGGGCTTGC CATGATCTTT CATGAACGGG ACTCACAGGG GCGGTTTCTT
CAGCTGCTCA AGTCCTGTTT TTCGAACACG CAAAAAGGGG TGGTCCACTG CTTTTCCGGC
ACCCGGGCCG AGCTGTCCGC CTACCTGGAC CTGGGCCTCT ATATCGGCAT CACCGGCGTG
CTGACCCACA AGACCCGGGG CCAGGACCTG CGGGACATGA TGGGCCACAT TCCGGACAGC
CGAATTCTCA TCGAAACCGA CGCGCCCTAC CTCACCCCGG CGCCGGAGCG CAACCGTTTC
CGGCGCAATG AACCCGCCTT TGTAAAAAGC GTGTTTGACA CCCTTGCCGC CATTAAAAAT
CGGGACCCCG CTGACCTGGC CGCCGTGCTG TGGAACAACA CCTGCCGTCT GTTTGACATT
TAA
|
|---|
| Protein sequence | MIQLFDSHCH LDDRSYADDL DKVLDRAHVA GVAAAMVVGT TLESSNRAAA LAAQHEGLFA
SVGVHPHDAA RCTEHQIKSL GRIAAENPKV RAWGETGLDF NRMYSPEGDQ EKWFERQIAA
AQKAGLAMIF HERDSQGRFL QLLKSCFSNT QKGVVHCFSG TRAELSAYLD LGLYIGITGV
LTHKTRGQDL RDMMGHIPDS RILIETDAPY LTPAPERNRF RRNEPAFVKS VFDTLAAIKN
RDPADLAAVL WNNTCRLFDI
|
|---|
| |