| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0298 |
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| Symbol | |
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| ID | 5693117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 342744 |
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| End bp | 343412 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641262879 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001528185 |
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| Protein GI | 158520315 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAGA TCAAGGTTGT CCGCAGGGTT CTGGATGTCA ACGAGATGAT GGCGGACCAG
AACCGCCGCC GGTTTGCCGA GAGCAATGTG TTTGTGCTCA ATGTGATGAG TTCGCCGGGC
GCGGGCAAGA CCACATTGCT GGAAAAGACG CTGGAGCTGT TGATGCCGGA CGTGCGGTGC
GCCGTTATCG TGGGCGATAT CTGCACCACC AACGACGCCG ATCGCCTGGC AAAATCAGGC
GTTGACGTGG TGCAGGTCAA TACCGACGAA TTCGGCGGAG ACTGCCACCT GGCGGCCCAT
GTGATCGAAA ACGCGGCCGC AAACTTCGAC CTGGCCGGCC TGGACCTGCT GATCGTGGAA
AACGTGGGTA ACCTGGTCTG CCCGGCCGAG TTTGACATCG GCGAGGATGC CCGGGCCGTG
GTGCTGGGTG TCACCGAGGG AGAGGACAAA CCCCTCAAGT ACCCCCTGAT GTTCCGTGTG
TGCGACGTGG CCCTGCTCAA CAAGGTGGAT TTGCTGCCCC ACCTGGAAAT CGATATCGAC
AGGGCGGAGG CCAATATCCT TCAGGTTCAT CCGGACATGC CGGTATTTCG CACCTCCTCC
AAAACCGGGG AAGGGCTGGA GCCGTGGCTT CAGTGGATTC GAAAAAAAGT GGCGGCCAAA
AAGGGTTGA
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| Protein sequence | MKEIKVVRRV LDVNEMMADQ NRRRFAESNV FVLNVMSSPG AGKTTLLEKT LELLMPDVRC
AVIVGDICTT NDADRLAKSG VDVVQVNTDE FGGDCHLAAH VIENAAANFD LAGLDLLIVE
NVGNLVCPAE FDIGEDARAV VLGVTEGEDK PLKYPLMFRV CDVALLNKVD LLPHLEIDID
RAEANILQVH PDMPVFRTSS KTGEGLEPWL QWIRKKVAAK KG
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