Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0296 |
Symbol | |
ID | 5693115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 340580 |
End bp | 341374 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641262877 |
Product | hypothetical protein |
Protein accession | YP_001528183 |
Protein GI | 158520313 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCGT TTGACCGGGA CATCGCGCTG GAGCAGCAGG CCCGGCAGCT GTTTTCAGCC ACTGTGACGC CCAACTGGTC GGTAAACCGC AACCCCGACG GCGGCTACCT CATGGCCCTG ATGGCCAACG GGGTTTTGCA GCACGCGGAA AAGCAGTGGA TCACGATTTT TACGGCCAAC TTCGTGTCCC GGTGCGTTCC CGGACCGGTC TCGCTGGCAG TGGATTTGCT TGGGACCTCC TCCCGGTTTG AGCGGTGGCA GGCCTCACTG GAACAGGAGG GAGACACAAA GGTCTTTGCC CTCTGCACCC TGACCGACAA CGCTGTTGAA GACCCGGAAA CCCGCTACGA GGCCGACCCG CCGGTGCTGG CCTCCCGCCA GGATTGCTTG GAATTTCCAG CCGTTCCCGG CTACACTATT TTTGAGCAGA TGGATGTGCG GCTGGATCCG GCCTGCACCG GGTGGCTCAC TTCAGGGGCC CTGACCGACC GGTCTGAACA GAAAGGGTGG ATCCGGTTCA AGGATGACCG CCCCTTTGAC ATGCTCTCGC TTTTGCTGGC CGCTGACGCC TTTCCGCCGC CGGTGCTGGC CAGCCACGGC ATGACGGCCT GGGTGCCCAC ACTGGAAATG TCGGTCAATA TCCGGCAGAA ACCCTCCAGC CCATGGCTCA GGTGCGTGTT CCGTTCCCGT TTTATTCACA ACGGCATCGT GGAGGAGGAT GGCCAGGTAT GGGATGAAAA CGATCGGCTG GTGGCCGTTT CCCGCCAGGT TTCCCAGTTC CGTAAAAATA CCTGA
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Protein sequence | MYSFDRDIAL EQQARQLFSA TVTPNWSVNR NPDGGYLMAL MANGVLQHAE KQWITIFTAN FVSRCVPGPV SLAVDLLGTS SRFERWQASL EQEGDTKVFA LCTLTDNAVE DPETRYEADP PVLASRQDCL EFPAVPGYTI FEQMDVRLDP ACTGWLTSGA LTDRSEQKGW IRFKDDRPFD MLSLLLAADA FPPPVLASHG MTAWVPTLEM SVNIRQKPSS PWLRCVFRSR FIHNGIVEED GQVWDENDRL VAVSRQVSQF RKNT
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