| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0237 |
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| Symbol | |
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| ID | 5693055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 260928 |
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| End bp | 263939 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262817 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001528124 |
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| Protein GI | 158520254 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCCC TGACAGTCAG ATCCGGTTAT TCGCTGATGT GGGGCACAGC CCCCATCAAG
GAGGTGTGCC GCGTGGCCCG GCAGCAGGGA TATGATCGCC TGGCCCTGAC CGACACGGAC
AACCTTTACG GGCTGTGGCA TTTTCTGGAC GCCTGCCGCC GGAACGATAT CACGCCGGTT
GTCGGGGCGG AACTTACCGA CCCCGCCACA ACAGACCGGG CCGTTCTTCT GGTAAAAAAC
CCGGAAGGCT ACAAAAACCT GTGCCGGCTC ATAACCGCCC GGCACCTTGA ACCGGACTTT
AAACTGGAAA CAGCCATTGC CCGGCATGCT GATGGCCTGG CCGTGCTGAC CCGCAATCCC
TGCCATTTGA AGCAGTGGCA TGAATCCGGT GTGGCGGTGT ATGGCGCCAT GCCCCGGCGG
CCGATGTCGC TGTCCAGCCC GCTGTGTCAG ACCGCCAGGT ACTTAAATGT TCCCCTGGTG
GCCACGCCCG GCAGCTTTTT TCTTTCTCCG CAAGACATGG ATGCCCACCG GATGCTGCGC
GCCATTGACC TGAACACCAC GGTTGACAGG CTTGGCCCGT TAGAAGCGGC GCCCGGGGAA
GCCTGGCTGG CATCCCCCCG GGAGTATGAG AAACGTTTTG AAGCCTGCCC GGAAGCTCTG
GCCAACACCC GTCGCCTTTC GGAAACCCTG ACGTTTACCG GCCCCGAATT CGGCCTGGTC
ATGCCCCCCT GGGAAAGCAA AACGGGCACG GACCCTGGCT CCGCCCTTCG GCAGGCCGCC
TACCGGGGCG CTCAGGCGCG GTATGGCCGG GACCTTCCGG AGCCTGTCGC ACGGCGCTTG
GAGCACGAAC TGAGTATCAT TATTCAAATG CGCTTTGCCG CTTACTTTCT GGTGGTGCAA
GACATTGTGC GGCTGAGCCC CAGGATTTGC GGCCGGGGAT CGGGCGCGGC CTCCCTGGTG
GCCTATTGCC TGCGTATCAC CAATGTCTGC CCGATAAAGC ACAACCTGTA TTTCGAGCGC
TTTTTAAACC CGGGCCGAAA GGACGCCCCG GATATTGACG TGGATTTTGC CTGGGATGAA
CGCGACACCG TCCTGGCAGC GGTGTTCGAG CGGTTTGGCG ATCATTGTGC CATGGTCTGC
AACCACGTGC GAATGCAGCC GAGAATGGCG GTCCGGGAGG TGGCCCGGGT ATATGGCCTG
ACCGAAGCGG AAATCAGCCG GGTGACCAAA AAAATGCCGT GGTTCTGGCG GCAGGACACC
GCCGGCCTGG ACATCCTGCG GGAACTGTCA GAGCGCCCGG AATCCCGGGA TCTGGACCTG
CCCGCGCCCT GGCCCGGGAT CATGGCCGTT GCCCGGAAAA TCTGCGGCGC GCCCCGGTAT
CTTTCCGTCC ATCCCGGCGG CGTGATCATC ACCCCCCGGC CTGTCTGCGA ATATGTTCCG
GTGGAAAGGG CCGCCAAGGG TGTCCGGATT ATCCAGTGGG AAAAAGACCA GGCCGAGGAT
GCCGGGCTGG TGAAAATCGA CCTGCTGGGC AACCGGAGCC TGGCCGTGAT CCGGGACGCC
ATTTACAACC TGCGGTCAAA CAACCACTTG CTCGACGAAT CCACGTGGGC GCCGGAGGAC
GACTTTGCCA CCCAGGAGGC GGTGTCCCAG GGCAAAACCA TGGGCTGTTT TTACATAGAG
AGCCCGGCCA CCCGGCTGTT GCAGAAAAAG TCCCGGGTGG GGGACTTTGA ACACCTGGTG
ATCCACAGCA GCATTATCCG GCCGGCAGCC AATGATTATA TCCAGGAATA CCTCCGCCGC
CTGCACGGCG CGTCCTGGGA CCCCATTCAC CCGCTTCTGG CGGATGTGCT GGACGAGACC
TTTGGCATCA TGGTGTACCA GGAAGACGTG TCCCGGGCCG CTGTGTCCGT GGCCGGGTTT
TCTCACGCCG ATGCCGACGG CCTGCGCAAG GTCATGTCCA AAAAAGACAA GGACCATGTT
CTGGCCGATT TTTACCGGCG CTTTGCGGAC GGGGCCGCCA AAAACGGGGT GACCCCGGAG
AAGATTCGCG AGATATGGCG GATGATGATG AGCTTTTCCG GGTATTCCTT CTGCAAGCCC
CACAGCGCCT CCTATGCACG GGTGTCGTTT CAGGCGGCCT GGCTCAAGAC CCACTATCCT
GCCGCGTTCA TGGCCGCCGT AATCAGCAAC CAGGGCGGGT TTTACAGCAC CTTTGCCTAT
GTCTCCGAGG CCCGTCGCTC CGGCATTACC ATCCTGGCCC CGGACGTCAA TGCAAGCGAC
ATCCGATGGC AGGGCAACGG CAACACCATC CGGGTGGGGC TTTCTGCTGT CGGTCATCTG
TCCCTTAAAA CCATGGAAAA AACGCTTGCC CACCGCAAGG CCGCACGTTT TACCGGCCTG
GAAGACTACA TGGACCGGGT CCGGCCGGAT GAGCCTGAAG CTCAGGCCCT TATTCAGAGC
GGCGCCTTTG ACGCGTTGTG CCCGGGCCGG TCCAGAAGCA TGATCCGGTG GCAATGGGCC
TGCTGGAAAA ACAACCGCCC GCCAGCATCG TCCTCGCCCC TTTTGTTTGA CACGGCTCCC
GGGCCGGTGG TCCCGCCCCC GCAGATAACC GAAGACCCGC TGGAAAGATA CCGGCAGGAG
TTTTCTGTTT TGGGCTTTTT GTGTGACACC CACCCCATGA CGCTGTATAA GACGGAACTG
GAGGGCCGGC AGACCATCAA GGCCAAACAC CTGGGCCGAT ACGCGGGCAA ACGCGTCTGC
GTGGCCGGCT GGTTGATCAC CGGCAAGGTC GTGCGCACGA AAAACGGCGA TCCCATGGAG
TTTTTGACCT TTGAAGATGA AACCGACATC TTTGAAGCCA CCTTTTTCCC AAAGACGTAT
ACCCGGTTCT GCCACATGAT CGACAGGGGA AGCCCCTTCC TCCTCTGGGG CACGGTGGAG
ACCAATTGGG GGGCTGTGAC ACTCACGGTG GAAAAAATAG AAGGCCTGCC GGACTACAAT
AACCGACTAT GA
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| Protein sequence | MIPLTVRSGY SLMWGTAPIK EVCRVARQQG YDRLALTDTD NLYGLWHFLD ACRRNDITPV
VGAELTDPAT TDRAVLLVKN PEGYKNLCRL ITARHLEPDF KLETAIARHA DGLAVLTRNP
CHLKQWHESG VAVYGAMPRR PMSLSSPLCQ TARYLNVPLV ATPGSFFLSP QDMDAHRMLR
AIDLNTTVDR LGPLEAAPGE AWLASPREYE KRFEACPEAL ANTRRLSETL TFTGPEFGLV
MPPWESKTGT DPGSALRQAA YRGAQARYGR DLPEPVARRL EHELSIIIQM RFAAYFLVVQ
DIVRLSPRIC GRGSGAASLV AYCLRITNVC PIKHNLYFER FLNPGRKDAP DIDVDFAWDE
RDTVLAAVFE RFGDHCAMVC NHVRMQPRMA VREVARVYGL TEAEISRVTK KMPWFWRQDT
AGLDILRELS ERPESRDLDL PAPWPGIMAV ARKICGAPRY LSVHPGGVII TPRPVCEYVP
VERAAKGVRI IQWEKDQAED AGLVKIDLLG NRSLAVIRDA IYNLRSNNHL LDESTWAPED
DFATQEAVSQ GKTMGCFYIE SPATRLLQKK SRVGDFEHLV IHSSIIRPAA NDYIQEYLRR
LHGASWDPIH PLLADVLDET FGIMVYQEDV SRAAVSVAGF SHADADGLRK VMSKKDKDHV
LADFYRRFAD GAAKNGVTPE KIREIWRMMM SFSGYSFCKP HSASYARVSF QAAWLKTHYP
AAFMAAVISN QGGFYSTFAY VSEARRSGIT ILAPDVNASD IRWQGNGNTI RVGLSAVGHL
SLKTMEKTLA HRKAARFTGL EDYMDRVRPD EPEAQALIQS GAFDALCPGR SRSMIRWQWA
CWKNNRPPAS SSPLLFDTAP GPVVPPPQIT EDPLERYRQE FSVLGFLCDT HPMTLYKTEL
EGRQTIKAKH LGRYAGKRVC VAGWLITGKV VRTKNGDPME FLTFEDETDI FEATFFPKTY
TRFCHMIDRG SPFLLWGTVE TNWGAVTLTV EKIEGLPDYN NRL
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