Gene Dole_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0185 
Symbol 
ID5693002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp203920 
End bp204675 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content58% 
IMG OID641262764 
Producthypothetical protein 
Protein accessionYP_001528072 
Protein GI158520202 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000524108 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA ACGCAACGCT GTTTGAGCTG TTTGAAAAGA AGGCAAAGAA GACCACCGTC 
ACCCATCTGT GCATGGGCCT GGGCTATACG GTGGTAACCA CGTCAGACGG CGGCATCGGT
ATTGCCTATA CCTTTTTTGA AAACAAGACC GCCTGCACGG TTCAAAAAAG TTATGAAAAC
CCGGAGGGGG CGCCTGCCAT CGGCCTGGTG GAACATATTC TGTCCGACAG CCCGATTCTG
CGCACCCAGG CCCTGGCCGC CATCAATGCG TTAAATTACA GCGCTGCCGC TTCCCTGGCG
CAGGGGCCGG ACAACGCGGA CCTGCTGGCC CAGATGGGCG TGGAAAAGGG AACACATGTG
GCCATGGTGG GGGCCTTTAA ACCCCTGATC AAGGTGATTC GGGAAAAAGA GGCCGAACTG
TCGCTGATGG ACGCGGGCAA GGGAATCGGT GATGAACAGG ACTTTTATGA AAAGCTGGGT
ACCTGGGCCG ATGTGCTGAT TCTTACCGCC ACCACGCTGC TGAACAACAC AACGGAAGCC
GTTCTCGGCC ATGCGGGCCC AGGCGTGCGT ACCGTGCTGC TGGGACCCAG CACCCCCCTG
GTCAAAGAGG CGTTTGCCGG CCTGCCTGTT GATTTTTTGG CAGGCACCGT TCCGATGGAT
GCGCAGGGTA CGATTCAGGC CATTCGCCAC GGCACAGGCA CGCCGGTGAT TCAGAGGTTT
GGCAGAAAAG TGGTGATGGC GATGGGGGAG GGATAG
 
Protein sequence
MKINATLFEL FEKKAKKTTV THLCMGLGYT VVTTSDGGIG IAYTFFENKT ACTVQKSYEN 
PEGAPAIGLV EHILSDSPIL RTQALAAINA LNYSAAASLA QGPDNADLLA QMGVEKGTHV
AMVGAFKPLI KVIREKEAEL SLMDAGKGIG DEQDFYEKLG TWADVLILTA TTLLNNTTEA
VLGHAGPGVR TVLLGPSTPL VKEAFAGLPV DFLAGTVPMD AQGTIQAIRH GTGTPVIQRF
GRKVVMAMGE G