Gene Dole_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0175 
Symbol 
ID5692992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp194367 
End bp195065 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content54% 
IMG OID641262754 
ProductTetR family transcriptional regulator 
Protein accessionYP_001528062 
Protein GI158520192 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000233696 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CGATAGGCCC CGGCCAGAAA AAACCGGCCA AAAACACCGT GCCCGGGAAA 
AAGGGAGATG ATACCCGGAA AATGATACTG GCCGCTGCCA GACAGATATT TGCCGCCCAC 
CCTTACAATG CCGCCAGCAT CCGCATGATC GCCACCCAGG GCGATTTTTA CCACGGCCTT 
ATCCGGTACC ATTTTCCCAG CAAGGCCGGC ATCTTTGAAG CGGTGATGGA AGATGCCTGC 
CGGTCCCTTG TCCAGGCCAA CAAAGAGTGG CTGGTGGAAA TATCAACCTT CCCGCCGGAA 
AAAGCGCTTT CCACCTATTT GGACAGATTC ATCGAATATT TTCAAAAACA GCCCGCCGTG 
CTTCGCATCA TTATCAACAA CCTCTCCCAC GAGAATCCGG CCACCTTGCC CGGCTATCAC 
CACCTGACCG GTTTTCTGGC CGACACCCGC CGGGATTTTG AAGCCATATT TCCAAACCTG 
TTTGCAACCG GAGATGTCAG CCGGTTTTTA AGCAGCCTCA ACGCCCTGAT TCTTCATTTT 
CTGGGCGCCG GTTCCATAGA AGCCCAAATC ATGGGGTTTC CCAGCCAGAG CCGGGACTAC 
CTGCAGTGGG TTAAAGAGAC CCTGTTTTTT ATCTTTCTGC CGGTGCTGGA AACCGCGGTG 
CGCCAATCCT CTGAATCCGC CCTGGATACC GGCAAATAA
 
Protein sequence
MKKTIGPGQK KPAKNTVPGK KGDDTRKMIL AAARQIFAAH PYNAASIRMI ATQGDFYHGL 
IRYHFPSKAG IFEAVMEDAC RSLVQANKEW LVEISTFPPE KALSTYLDRF IEYFQKQPAV 
LRIIINNLSH ENPATLPGYH HLTGFLADTR RDFEAIFPNL FATGDVSRFL SSLNALILHF 
LGAGSIEAQI MGFPSQSRDY LQWVKETLFF IFLPVLETAV RQSSESALDT GK