Gene Dole_0126 details

Gene Information

• Locus tag: Dole_0126
• ID: 5692941
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 140761
• End bp: 142818
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641262703
• Product: formate dehydrogenase
• Protein accession: YP_001528013
• Protein GI: 158520143
• COG category: [C] Energy production and conversion
• COG ID: [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG ACACCATTTG CCGGCTCTGT TCGGCCTGCT GCCCGGTTGA AGCCCACATC 
GAGAAGGGCC GGCTGGTGGC CGCGGAAAGA AAATCTTTTC TGCCGGCGTC AAAGGCGCGG 
CAATGCCCCA AGCTCAAGGC GGCTCCGGAT ATCGTCTATT CACCGGACCG TATTCTAAAA 
CCGCTGATAA GGGACGCTTC CGGCCCATCA GGGTTCCGGG AAGCCTCCTG GGATGAAGCC 
CTGGACCGGG TGGCCGGCAG CCTTCTGAAA TGCCGGGAGG TTGCCGGGCC GGAACGCCTG 
GCCTGGCTGA GGGGGATGGC CGCGGACTGG GGCGCTCCCT GGGATTACGC CAATCGCCTC 
ATGAACGCCT TTGGCGCGCC CAACACCATC GGCAACGGTT CGGTCTGCCA CGTGGCCCGG 
GAGATGGCCC ACAATTTCAC CTATGGGGCC ATGACCCTGG CCCAGCCCAA AGATGCCGCC 
TGTATTGTCG TGTGGGGAAA GAACGACCGC AACACCGCCC CCGGTGTTTT TGAAGCCATT 
TGTCATGCCC AGCGGCAGGG CGCGCGGCTG ATTGTTATTG ACCCGGTTAA AAATGCCATG 
GCGGAGATGG CCGACCTGTG GCTGCCGGTG AAGCCGGCCC ATGACGGCCT TCTGGCCATG 
GCCATGATCC ACGAGATCAT CGCGCAGGAT CTCTATGACG TTGATTTTGT ATCCCGCTAT 
ACCACCGGTT TTGATGAACT GGCGGCCGCG GCCCGGCCGT TTTCACCGGA TAAAGTGGCT 
GAAAAAATAT GGCTGTCCCC GGCTGACATT CGACGGGCCA CCCGCTGGTA CGCCGGTACC 
CCACCGGCCT GCATCATTGA CGGTAACGGC CTGGATATGC AGCTGCAGGC GTTTCAGGCC 
ACCCGGGCCG TCTGTATACT GCGGGCGCTG ACCGGTAATA TTGATCGGCC CGGCGGCGAC 
TTTATTCCCC AGCCGGTGCC TGTGCGGGAT ATGCAGCTCA AACACCGCCT GCCTGGCGGG 
GTTGCCCCCG TGACACATGA CTTTCCCCTG TTTGACCAGT TCCACCCCAC CTGGGGCCGG 
CACGCCCAGT CCTGCCTGGT GGACGCCATG GTGGATCACC GGCCCTATCC GGTCACCACC 
CTGGTGGTGC AGTCCGGCAA TCCGGCCGTG ACCATGACCG ATGCCAACCG GGTGGTCCGG 
GGCCTGAAGA ACCTGGATTT TCTGGTGGTC ATCGACATGT TTATGACCCG GACCGCCCGC 
CTGGCCGACG TGATTCTGCC GGCCTGCGGC TGTTTTGAAA AAACCCAGCT CAATCGGGCT 
TATCTTCGAA ACAGCCCGGT TATGCTGCAG GACCAGGTCA TTGAGTGCAT CGGCGAGAGC 
CGGCCGGACT GGCAGATCAC CTTTGAGCTG GGCCGGCGGC TGGGCCTGGC GGATGCGTTT 
CCCTGGGAAA CGGTGGAGGA GGCCATTGAT TATCAGCTGG AGCCTTCCGG TATTACCGTG 
GCCGCTCTGC GGCAAAACCC GGATGGCCTC CGGGCGGCTC CACTTGCATT TGAAAAACAT 
CATCAGCAGG GGTTTGCCAC GCCTTCGAAA AAGGTGGAAT TTGTTTCCGA CCGTCTGAGG 
GAAAAGGGCT TTCCCGCAGT GCCGTTCGCG GACGGCGGCC TTGGGGAAGC CATCAGTTTT 
GCCGACCCGG CCGACCCGGA CCCCCTGATC GGAATGAGCG GAGAGCGGAC CCCCCGTTTT 
ACCCATACCC AGTTTCATAC CATCGCGTCG CTGGTCAGGC AGGAACCCGA AGGGCTGGTG 
GAGATTCGGG ACGCCGACGC CCGGCGCAAA AATATCGGCA ACGGGGATTG GGTCCGAATA 
AAAACGCCCC GGGGCGAGGT CCGCATGAAG GCCCGTATCT CCGACCGGAT CCGGCCGGGG 
TCGATCCTGA TCGCCTGGGG CTGGGGGGAC GTCGATCCGG CGGCCAATGT CAACAACCTG 
ACCGATGATA ATCAGCGCGA TCCGGTAACA GCCACGCCTT CCGGCCGGAG TTTCATGTGC 
AGTCTCGAAA AAGAGTAA 

 

Protein sequence

MKKDTICRLC SACCPVEAHI EKGRLVAAER KSFLPASKAR QCPKLKAAPD IVYSPDRILK 
PLIRDASGPS GFREASWDEA LDRVAGSLLK CREVAGPERL AWLRGMAADW GAPWDYANRL 
MNAFGAPNTI GNGSVCHVAR EMAHNFTYGA MTLAQPKDAA CIVVWGKNDR NTAPGVFEAI 
CHAQRQGARL IVIDPVKNAM AEMADLWLPV KPAHDGLLAM AMIHEIIAQD LYDVDFVSRY 
TTGFDELAAA ARPFSPDKVA EKIWLSPADI RRATRWYAGT PPACIIDGNG LDMQLQAFQA 
TRAVCILRAL TGNIDRPGGD FIPQPVPVRD MQLKHRLPGG VAPVTHDFPL FDQFHPTWGR 
HAQSCLVDAM VDHRPYPVTT LVVQSGNPAV TMTDANRVVR GLKNLDFLVV IDMFMTRTAR 
LADVILPACG CFEKTQLNRA YLRNSPVMLQ DQVIECIGES RPDWQITFEL GRRLGLADAF 
PWETVEEAID YQLEPSGITV AALRQNPDGL RAAPLAFEKH HQQGFATPSK KVEFVSDRLR 
EKGFPAVPFA DGGLGEAISF ADPADPDPLI GMSGERTPRF THTQFHTIAS LVRQEPEGLV 
EIRDADARRK NIGNGDWVRI KTPRGEVRMK ARISDRIRPG SILIAWGWGD VDPAANVNNL 
TDDNQRDPVT ATPSGRSFMC SLEKE