| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0114 |
|---|
| Symbol | |
|---|
| ID | 5692929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 126600 |
|---|
| End bp | 127382 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641262691 |
|---|
| Product | regulatory protein GntR HTH |
|---|
| Protein accession | YP_001528001 |
|---|
| Protein GI | 158520131 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCAGC GATTTAAAGC CGTTGTCAAC TCCCTCATGC GAGACATCTT TTCAAATAAA
CTCGCTCCCG GCGACAAGCT TGCCGCCGAG CGGGAGCTTT CCAAAAAAAT GGATATCGAC
CGCACCTCCC TGCGAATCGC TCTCAAGCAG CTGGAGGCCC TGGGCGTCCT GGAGATTCGC
CAGGGAGACG GCATCTATGT GAAAGACTAT ATGAAAAATG CCGGACTCGA TTTTCTTCGC
CTGCTTTTTC TTCAGGAGGA AAAAGAGGGT GAGGGGCCGG TCATTGACGA GTATATCATT
GACGAGGCCA TGGAGTTCTG GGTGGAGTTC ATGCCCCTGA TGGTCAAGGT GGCCCTTCGC
CGCATCACCC CCCTGCACAT AAAGCGGTTC GTGGACACGT TCAACAACGA GCTGGAGGTG
ATCGGAGACC GGGAAAAGGT TGTCGAATCC GAGCTGTTGC AGCAGGAGAT GGTGGCCGAG
GCCACGGACA ACCTTCTGTT TCTGCTGCTG TCCAATACCA CCCGGCCCCT GCGGAAAAAA
TTTCTGGAGA TTTTTGTAAG CCAGCTGGAC AAGGAGACCA TGCGGCGCCA TGTCGAGTTC
AAGCGGGCCC TGCTCCGGTC CGACCTGGCT ACCGACCCCA GGGGGCCGGA GGTCATCTCC
GAAGGATATA AGAAAATGAT GATCTACTAC CGCGATGTGG CGCGAAAGTC GTGGCAGGTC
ACGCCTGAAG ATGACAAACT GGTAAAACAG TTTATGGCTT CCGTGGATGC CGGGCAAGCG
TAA
|
|---|
| Protein sequence | MGQRFKAVVN SLMRDIFSNK LAPGDKLAAE RELSKKMDID RTSLRIALKQ LEALGVLEIR
QGDGIYVKDY MKNAGLDFLR LLFLQEEKEG EGPVIDEYII DEAMEFWVEF MPLMVKVALR
RITPLHIKRF VDTFNNELEV IGDREKVVES ELLQQEMVAE ATDNLLFLLL SNTTRPLRKK
FLEIFVSQLD KETMRRHVEF KRALLRSDLA TDPRGPEVIS EGYKKMMIYY RDVARKSWQV
TPEDDKLVKQ FMASVDAGQA
|
|---|
| |