| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0104 |
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| Symbol | |
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| ID | 5692919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 116099 |
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| End bp | 117487 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641262681 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001527991 |
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| Protein GI | 158520121 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGAT CCACCATAGC GGCCATTGCA ACCCCCGCAG CGCCGGGCGG CATTGGCATT
GTCCGGCTTT CCGGCCCCCG GGCCGTTGCC ATCGCCCTTT CTGTCTTTTC CTCCCGGCCG
GATGCGGCCG CAGCCTCCCT TTCCGAAGCC GGCGCCGAGT CCCACCGGAT GTATCATGGA
TATGTGTTTG ACGACGACGC TCTGGTGGAC GAGGTTCTGC TGGTGGTAAT GCGGGCCCCC
CGGTCCTACA CCGGAGAGGA CGTGGCTGAA ATTCACACCC ATGGCGGCCC GGCCGTGGTC
AGCGCCGTGT GCGACCTGGT GCTGCGGGCC GGTGCCGAGC CGGCGGCGCC GGGGGAGTTT
ACCCAACGGG CCTTTTTGAA CGGCCGCATC GATCTGACCC AGGCCGAGGC CGTGGCCGAC
ATGATCGAGG CGGCCTCTAT TGAGCAGGTA AAGGCCGCGG CGGCCCAGGT GTCCGGTGAA
ATTCGGCAAG CGGTGTCCGG GCTGAAACAG TCGCTGGCCG GCCTGATGGC CGAAATGGAG
GCCGCCATCG AATTTGATGA CCAGGTGGAG GGCTCCTTTT CCCCTGAAAA GGCCGCCTGT
CGAATCGAAA CCGAAGTGCT GCCCTGCCTG CAGGACCTGC TGGACCGGCG CCGAGCGACT
GAAGCCGGCA GGGGCGCCAC CGTGGTCATC GCCGGCCCGC CCAACGCGGG AAAATCGACG
CTGCTCAACC GGCTGCTGGG AACCGACCGC GCCCTTGTTT CAGAGATCCC CGGCACCACC
CGGGACCTGG TGGACGGGCG GGTGTGGGTG TCCGGCACGC CCTTTGTGTT TACCGACACG
GCGGGCCTGC GACCTGACTC CGGAGATGCG GTGGAGGCCA TGGGCATGGC CCGGGCCCGC
ACCGCCATGG ACCAGGCGGA CCTGATTCTG TTTGTTGTGG ACGCGGCTGC CGGTATGGGG
CCGGAAAGTG GCGCGCTTTT TTGCGAGGCA TCGGCAAAAC CGTTCGTGGT GGTGGCCAAT
AAAAGCGACC TGCCCGAAGC CAGGGGCTTT ATGCCGCCGT CTGCCTGGCC GGCAGCGCCG
GTGGTGCATG TGTCGGCCCT TCACGGGCTT GGAATTAAAG AGCTTAAAAA CCTCCTGGTC
CGCATGGTTG GCGAACAGGC GGTGCCGGCG AGCGGCCGGG CCGCACCCAA CCCCAGGCAC
CGCGCCGCCC TGGTCGCCTG CCGGGAAGCC TTGGTCGCCG CCGGCGCCGC TCTGAAAAAC
GGAGTGCCGG CCGACGTGGC GGTTCTGGAT ATTCGGGCCG CCGTTGACCG CCTGAACGAG
ATCTCCGGGG AAGGGGCCGG CCCGACGGTG CTGGATGCAA TTTTCGAGCG GTTCTGCATC
GGCAAATAG
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| Protein sequence | MERSTIAAIA TPAAPGGIGI VRLSGPRAVA IALSVFSSRP DAAAASLSEA GAESHRMYHG
YVFDDDALVD EVLLVVMRAP RSYTGEDVAE IHTHGGPAVV SAVCDLVLRA GAEPAAPGEF
TQRAFLNGRI DLTQAEAVAD MIEAASIEQV KAAAAQVSGE IRQAVSGLKQ SLAGLMAEME
AAIEFDDQVE GSFSPEKAAC RIETEVLPCL QDLLDRRRAT EAGRGATVVI AGPPNAGKST
LLNRLLGTDR ALVSEIPGTT RDLVDGRVWV SGTPFVFTDT AGLRPDSGDA VEAMGMARAR
TAMDQADLIL FVVDAAAGMG PESGALFCEA SAKPFVVVAN KSDLPEARGF MPPSAWPAAP
VVHVSALHGL GIKELKNLLV RMVGEQAVPA SGRAAPNPRH RAALVACREA LVAAGAALKN
GVPADVAVLD IRAAVDRLNE ISGEGAGPTV LDAIFERFCI GK
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