| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7339 |
|---|
| Symbol | |
|---|
| ID | 5675640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 8979968 |
|---|
| End bp | 8980474 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641246176 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511564 |
|---|
| Protein GI | 158319056 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0759] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.634024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG TCGCCGGCGT GGGCATCGCG GTCGCCGTCT TGGCGTTCGT CGACCTTGTT
CTCGTCGCGA TCGCGACGTC CGTCAGGTTC GCCACGCTGG CCAGGACGTC CAACGGCGCG
GTGCGCGGCC CGCTGGCGTG GACCCTCGCC GCGGCGGTCC GGGTCTACCG GGCCGGCTGG
TCGGGGCGGA ACGCGGGCTG TTGCCGCTTC GAGCCGTCCT GTAGCGCCTA CGCGCTGACG
GCGGTGACCC GCCACGGCGG CGTCATCGGT GGTCTGCTGG CCATCCGCCG GTTGTTGCGC
TGCCAGCCGC TTTCCGCGGG TGGTTACGAC CCGGTGCCCG GTGAGGCGCC CGGAGGGTCC
GTCGATCCCG GCACCGGTCG GTGCCGGACG GCCTCGGGTC CGGTGGGCGC CGTCGACGCC
GGCACGAGGC ACGGGCATGG CACTGCGTCC CTCCACCGGG GGACGCGTTC CGAGATCGTC
GGTTCCCGTC GCGGAACGCG GGTGTGA
|
|---|
| Protein sequence | MSAVAGVGIA VAVLAFVDLV LVAIATSVRF ATLARTSNGA VRGPLAWTLA AAVRVYRAGW
SGRNAGCCRF EPSCSAYALT AVTRHGGVIG GLLAIRRLLR CQPLSAGGYD PVPGEAPGGS
VDPGTGRCRT ASGPVGAVDA GTRHGHGTAS LHRGTRSEIV GSRRGTRV
|
|---|
| |