Gene Franean1_7307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7307 
Symbol 
ID5675608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8931620 
End bp8931991 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content73% 
IMG OID641246144 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_001511532 
Protein GI158319024 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.163924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.114263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTT CCGGTGTTCC CCCGCGCGAC TCCGGGGTCG TCGAGGTCGC GCGGTTCGAC 
GTGTTGCCAG GGTCCGAAGA GGAGTTCGCC GCGGCGTACC GAACCGTCCG GCACGAGCTG
GTCGCCACGC CCGGGTGCCG CTCCGCCCGG ATGACCAGGG GGGTCGAGTC CCCGTCCAGC
TTCGTGCTCC TGGTCGACTG GGACAGCCTG GAAGCGCACA CCGAGACCTT CCGCGGTTCC
GACCGGTTCA CCCGGTGGCG GGCGGCGCTC TCCCCGTTCT TCGCGGCCGC GCCGTCGGTG
GAGCACGTCG TGGCGATCAC AGACCCCGTC GCGCCGGCAC CGGCGTCGGC GGACCGGCCG
GCCAGCTCCT GA
 
Protein sequence
MSVSGVPPRD SGVVEVARFD VLPGSEEEFA AAYRTVRHEL VATPGCRSAR MTRGVESPSS 
FVLLVDWDSL EAHTETFRGS DRFTRWRAAL SPFFAAAPSV EHVVAITDPV APAPASADRP
ASS