Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7297 |
Symbol | |
ID | 5675598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8915937 |
End bp | 8917439 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641246134 |
Product | putative integral membrane protein |
Protein accession | YP_001511522 |
Protein GI | 158319014 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0189864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCTG AACGCAGCTA CCGCTTCGGG CCGCTGGAGC GCGGCGGTGT GCTCCTCGGC ATGCGCTGGC CTCAGCTCGC GCTCCTGATC GGCGTGATGC TCTGTGTTCT GGGAGCGCTG CGTTCGCCGT TGGTACTCGT GCCTGTGTGG CTGCTACTTG CCGCAGGGTT CGCCTTCGTC GCGTTCGTCC GGGTGGAGGA TCGTAACCTC GACCAGTGGG TGCCGATCGT GTTCGGCTTC ACGATGCAGA AGGTGACGGG CGAGACGGTG TTCCGTGGAG GGTTCTTCCG GCTCGGTCCC GGCGACGACC GGATCACCAG GACGGTCCTG CCAGGGCCGC TGTCGAGCCT GGTCATGTTG TCGGTTCCGG TCGGTGGCAG CCGGTACGTG GCTGTCGTCA AGGACGTGAA GAAGCAGACC TACACCGCTG TCCTCCAGGT GAAGGGCAGC CAGTTCGCGC TGCTCGAGTC CGGGGACCAG CAGGCCCGGG TGGATGCCTG GGGCGAACTG CTGGCCGGTC TCACCGGTGG TGGCGGCAAG CTGTCCCGCA TCCAGTGGCT GGAGCGGACG CTGCCGGACT CGGGCGACCA GCTCCAGCGG CACTGGCGGG TGCGCGGTCA TCACGACGAT TCGTGGGCGT CGCAGGCGTA CGAGCAGGTC ATCGACGCGG CCGGGCCGGT GGCGCAGCGG CACGAGACCT ACCTTTCCTT CCAGCTCCGG GCGAAGGACG CCCGCCGGGC GATCCAACGC GCCGGCGGCG GCGACCAGGC CGCGTGCGCC GTCCTGCTCG GTGAGCTGCG GACGATGGAG GCGGCACTCG CCAGGGCGTC GATCAGCACC GTGGGCTGGC TGCCACCGCG GGCGCTGGCC GCGGTCATCC GCACCACCTA CGACCCGTAC TCGATCGAGA TGATCGATGC CCGGGGTGGG GCGAGCACCG ACCTCGCGGG TGGGCTGAAG GGCCTGCCGT CCGGCATCGA CCCGGCGATC GCCGGCCCGG TCCGGACGGT CAACGCCTGG GACCACTACC GCACCGACTC CGGCTTCCAC ACCACGTACT GGATCAACGG CTGGCCCCGG GTTCCCTCAC CGGCCGCCTT CCTCGCGCCG CTGCTGATGG AGACCACGTG CCGGCGCACG GTGTCGCTCG TCGTGGAGCC GCTGCCCGGC CGGAAGGCGG AGAAGGCGGT CAACCGGCGC CGGATGGCGC ACCTCGGTGA GCAGCAGATG CGGGACAAGG TCGGCAAGGT CACGACCCAG CGGGATGTGG CCGAGGCCGA TGAGGTCGAA CGCCGTGAGC AGGAGCTGAT CGCGGGCTTC GGCGCCTTCC GGTTCCACGG GTTCGTCACC GTCTCCGCCG ACGACCTCGA GTCGCTCGCG GACGCCTGCG GTGAGGCCGA GACCCTGGCC TCGCGCAGCC GCCTCGAAAT GGTCCGTCTC GTCGGCGAGC AGGACCAGGG CTTCAGCGTC GGCGCGCTGC CGCTCGCCGT GGGGGTTGCG TGA
|
Protein sequence | MAAERSYRFG PLERGGVLLG MRWPQLALLI GVMLCVLGAL RSPLVLVPVW LLLAAGFAFV AFVRVEDRNL DQWVPIVFGF TMQKVTGETV FRGGFFRLGP GDDRITRTVL PGPLSSLVML SVPVGGSRYV AVVKDVKKQT YTAVLQVKGS QFALLESGDQ QARVDAWGEL LAGLTGGGGK LSRIQWLERT LPDSGDQLQR HWRVRGHHDD SWASQAYEQV IDAAGPVAQR HETYLSFQLR AKDARRAIQR AGGGDQAACA VLLGELRTME AALARASIST VGWLPPRALA AVIRTTYDPY SIEMIDARGG ASTDLAGGLK GLPSGIDPAI AGPVRTVNAW DHYRTDSGFH TTYWINGWPR VPSPAAFLAP LLMETTCRRT VSLVVEPLPG RKAEKAVNRR RMAHLGEQQM RDKVGKVTTQ RDVAEADEVE RREQELIAGF GAFRFHGFVT VSADDLESLA DACGEAETLA SRSRLEMVRL VGEQDQGFSV GALPLAVGVA
|
| |