Gene Franean1_7297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7297 
Symbol 
ID5675598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8915937 
End bp8917439 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content70% 
IMG OID641246134 
Productputative integral membrane protein 
Protein accessionYP_001511522 
Protein GI158319014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0189864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG AACGCAGCTA CCGCTTCGGG CCGCTGGAGC GCGGCGGTGT GCTCCTCGGC 
ATGCGCTGGC CTCAGCTCGC GCTCCTGATC GGCGTGATGC TCTGTGTTCT GGGAGCGCTG
CGTTCGCCGT TGGTACTCGT GCCTGTGTGG CTGCTACTTG CCGCAGGGTT CGCCTTCGTC
GCGTTCGTCC GGGTGGAGGA TCGTAACCTC GACCAGTGGG TGCCGATCGT GTTCGGCTTC
ACGATGCAGA AGGTGACGGG CGAGACGGTG TTCCGTGGAG GGTTCTTCCG GCTCGGTCCC
GGCGACGACC GGATCACCAG GACGGTCCTG CCAGGGCCGC TGTCGAGCCT GGTCATGTTG
TCGGTTCCGG TCGGTGGCAG CCGGTACGTG GCTGTCGTCA AGGACGTGAA GAAGCAGACC
TACACCGCTG TCCTCCAGGT GAAGGGCAGC CAGTTCGCGC TGCTCGAGTC CGGGGACCAG
CAGGCCCGGG TGGATGCCTG GGGCGAACTG CTGGCCGGTC TCACCGGTGG TGGCGGCAAG
CTGTCCCGCA TCCAGTGGCT GGAGCGGACG CTGCCGGACT CGGGCGACCA GCTCCAGCGG
CACTGGCGGG TGCGCGGTCA TCACGACGAT TCGTGGGCGT CGCAGGCGTA CGAGCAGGTC
ATCGACGCGG CCGGGCCGGT GGCGCAGCGG CACGAGACCT ACCTTTCCTT CCAGCTCCGG
GCGAAGGACG CCCGCCGGGC GATCCAACGC GCCGGCGGCG GCGACCAGGC CGCGTGCGCC
GTCCTGCTCG GTGAGCTGCG GACGATGGAG GCGGCACTCG CCAGGGCGTC GATCAGCACC
GTGGGCTGGC TGCCACCGCG GGCGCTGGCC GCGGTCATCC GCACCACCTA CGACCCGTAC
TCGATCGAGA TGATCGATGC CCGGGGTGGG GCGAGCACCG ACCTCGCGGG TGGGCTGAAG
GGCCTGCCGT CCGGCATCGA CCCGGCGATC GCCGGCCCGG TCCGGACGGT CAACGCCTGG
GACCACTACC GCACCGACTC CGGCTTCCAC ACCACGTACT GGATCAACGG CTGGCCCCGG
GTTCCCTCAC CGGCCGCCTT CCTCGCGCCG CTGCTGATGG AGACCACGTG CCGGCGCACG
GTGTCGCTCG TCGTGGAGCC GCTGCCCGGC CGGAAGGCGG AGAAGGCGGT CAACCGGCGC
CGGATGGCGC ACCTCGGTGA GCAGCAGATG CGGGACAAGG TCGGCAAGGT CACGACCCAG
CGGGATGTGG CCGAGGCCGA TGAGGTCGAA CGCCGTGAGC AGGAGCTGAT CGCGGGCTTC
GGCGCCTTCC GGTTCCACGG GTTCGTCACC GTCTCCGCCG ACGACCTCGA GTCGCTCGCG
GACGCCTGCG GTGAGGCCGA GACCCTGGCC TCGCGCAGCC GCCTCGAAAT GGTCCGTCTC
GTCGGCGAGC AGGACCAGGG CTTCAGCGTC GGCGCGCTGC CGCTCGCCGT GGGGGTTGCG
TGA
 
Protein sequence
MAAERSYRFG PLERGGVLLG MRWPQLALLI GVMLCVLGAL RSPLVLVPVW LLLAAGFAFV 
AFVRVEDRNL DQWVPIVFGF TMQKVTGETV FRGGFFRLGP GDDRITRTVL PGPLSSLVML
SVPVGGSRYV AVVKDVKKQT YTAVLQVKGS QFALLESGDQ QARVDAWGEL LAGLTGGGGK
LSRIQWLERT LPDSGDQLQR HWRVRGHHDD SWASQAYEQV IDAAGPVAQR HETYLSFQLR
AKDARRAIQR AGGGDQAACA VLLGELRTME AALARASIST VGWLPPRALA AVIRTTYDPY
SIEMIDARGG ASTDLAGGLK GLPSGIDPAI AGPVRTVNAW DHYRTDSGFH TTYWINGWPR
VPSPAAFLAP LLMETTCRRT VSLVVEPLPG RKAEKAVNRR RMAHLGEQQM RDKVGKVTTQ
RDVAEADEVE RREQELIAGF GAFRFHGFVT VSADDLESLA DACGEAETLA SRSRLEMVRL
VGEQDQGFSV GALPLAVGVA