| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7282 |
|---|
| Symbol | |
|---|
| ID | 5675583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 8893056 |
|---|
| End bp | 8895659 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 867 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641246119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001511507 |
|---|
| Protein GI | 158318999 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.827215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.313024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCCC CGCACCTGGC CGGATCGCCG TTCCCGGCCG GCCGGCCGGT CACCGCGCGG
GTCCCGTCCT GGATACGGCG GGCGGCGCTG ACCACCCTCG CGGCGGCCGC GATCGGGGGC
GGTGGCCTGC TGACGGCCGT CCCCGCGCAC GCCCAACCGG TGGCGCCGCT GCCCCCGGTC
AGCTCGGCGG ACGCGAAGAA GCAGTCGAAC CTCGTCGACG CCGAGGACAT CCGGCTGCGC
TCGATGTTCG AACGTTTCGG GGTGCTGACC GCGCCGACGC TCGTCGAGGT CGCGGGCAGC
CTGCCCACCC TGCTGCTGCC GGCGCGCCAG GCCCCCTACA CCGCGGGGGA CGTCGTCGCG
GCCGGCGGCG GGCGCCGCGA GGTGGACGGC GCCGTGCTGT TCACCGCGAA CGTGCTGGTA
GGCCCGCAGG CCCGGCTCGT GATCGATCCC AGCGTGACCA CGTTGCGCCT GGCCAGCGGC
GCGTCCGGGT TCGCCTCGGT CGCCACCTGG CGCGGCGGGC TGGAGTTCGC CGGGCGGTCC
CCGGAGCAGC CGCTGACCGT CGTCGGATGG GACGTTCAGA ACCTCGAGCC GGACAAGCTC
ACCGTGGACG GCCGCGCCTA CATCCGCACC ATGGGCGGCG AGCTGATCAT GCGCAACACC
AGCGCCAACC ACCTTGGCTT CTGGAACGGC CGGACCGGCG GCGTGGCCTG GACGGGAAGC
AAGGGCGAGC CGAGCACGGG CGGCGCGGCG AACTCGACCC TGAGCGACAA CATCTACGGC
GCGTACGTCT CCGGCAGCGA GGGCATCCAG ATGGTCGGTG TGCGCCTCAC CGACAACGAG
CGCTCCGGCC TGGCCGTGCA CCGGGACGCC ATCACCACGC TCGTGTCCGG GGTGACGGCG
GCCCGCAACC ACGGCGACGG CATGACCATC GACCGTGCCT CGGGCTCCCG GGTGATGCGC
AGCACCGTGA GTGACAACAG CGGCGACGGC ATCTCGCTGG ACGGCCGTGG CCTCGGCGTG
GTCGCCACCG CGACCGGAGT CCAGGTCAAC CAGATCAAGG ACACCCTGAT CGAGGAGAAC
ACCGTCTCCG GCAACGGCCG GTACGGCATC CGGGTCGTCG GCGGCGAGAA CACCGTCGTC
CGCACGAACA CGATCAGCGG CGGCCAGCTC GGCATCGTCG TCAAGAGCGG CGCCAACGGC
ACCCAGATCA CAGGGAACAA GGTGACGGGG GCGGAGGAGG CCGGCATCCA GATCGGCCCG
GACGCCCGCC GCACCGCCAT CGTCGACAAC AAGCTCGCCG ACGGCCGCCT CGGCATGCTC
ACCCAGGACG CTCTCACCAC CATCATCAGC CGCAACCAGG TGAGCGGCGC CACCGACTTC
GCCATCACGC TGCGTGGCGT CTCGGACGGC AGCACGATCC AGCACAACAC CCTCGCCGGC
GAGGGCTGGC GCGCGGTCGA CACCCGCAAG GCGCTGGGGA TCCGCTCACG CGACGTGCAC
AGCAACAACT CCGATGCCTG GGTGTCACGC GCGCCGAAGC ACTGGTACAC GCTGCTTCGC
CGCCATCCCG CCCTCATCGT GTGGGGCCTG GTGGCGCTGT TCCCGCTCGC CGGCTGGTGG
GCGCGGCGGC GGGCCCGGCG CCGTCCGCCG CAGCACCCCT ACCCCGAGTC CGAGCTGCTG
GTCCGCCGCC TGACCGGGGG CACGATGCGC CCCGATCCCG CCTTCTCCGG CATCCCCGAC
CAGCGGACGG AGTCCTCGGC GGCCCATTCG CCCGCGGGCA CCGCACTTCC CCGGGTGCCC
GCGGAGCGCT ACCCCACGCC GGGCCGAGTG CGGCCGGCCC CGGCCAGGGC TGACACGGGC
GTCCTGGCCC CCGCGGCACC CGTGCTCACC GCGGCGAGCC CGGCGGGGGG TGCGCTGGAC
GTCCAGCCAG CCCCCGGCGG TCGGGCCAGG TCTGGCTCCC GCCGCCGCGC CGGCGCGGCG
GAGCCGGGTC GATCCCCGGC GAAGCGGTCA CGGTCCGCGA CAGCCGGCTC CGACGATACG
GCCGCGCTCC GTACGGGTGG CTCCGGTACC GGTCACTCCG GTACCGGCGA CCTTGACGGC
GACCGCAGTG GCACCGACGA CGCCGGCGCC GCTCTGTCGC CGGCCGCGAC ACTGACTCCG
GCCGCCGCGC CGATCAGTGA GGACGCCCAC CCGACCCTGC GCGGCCTGCG TTTCTACCGC
ACCCCTCGGG ACCTGTCGGT CGGACCAGAC ATGTCGGCGG GAGAGGTCAC GACCGAGATC
ACGACACGGC CGTTCGACGG CGCCGACCAC CTCGCCGGTC CCGCCCAGTG GCCGCGCGCC
GAATGGGAGC AGACGCCGGA GCCGGACCCC TACTGGTCCG GCGACCAGGG CCCGGACGGC
CAGTGGTCGG ACGGCCAGTG GTCGGACGGG CGGATCACCA GTGCCCCGAT CCCGGACACC
CGCCAGCCGA TGGCGGATCA CGGCGCCCAG CCGGCGATGT CCAAGCCCGG TCCGGACGGC
GACGAGAACC TCGAGATCAT CGATCCGGTG GGCACGGCGC CAGGTCGCCG CCGCCGCCGT
CCCAAAGGGG GAAACAGCAG GTGA
|
|---|
| Protein sequence | MRAPHLAGSP FPAGRPVTAR VPSWIRRAAL TTLAAAAIGG GGLLTAVPAH AQPVAPLPPV
SSADAKKQSN LVDAEDIRLR SMFERFGVLT APTLVEVAGS LPTLLLPARQ APYTAGDVVA
AGGGRREVDG AVLFTANVLV GPQARLVIDP SVTTLRLASG ASGFASVATW RGGLEFAGRS
PEQPLTVVGW DVQNLEPDKL TVDGRAYIRT MGGELIMRNT SANHLGFWNG RTGGVAWTGS
KGEPSTGGAA NSTLSDNIYG AYVSGSEGIQ MVGVRLTDNE RSGLAVHRDA ITTLVSGVTA
ARNHGDGMTI DRASGSRVMR STVSDNSGDG ISLDGRGLGV VATATGVQVN QIKDTLIEEN
TVSGNGRYGI RVVGGENTVV RTNTISGGQL GIVVKSGANG TQITGNKVTG AEEAGIQIGP
DARRTAIVDN KLADGRLGML TQDALTTIIS RNQVSGATDF AITLRGVSDG STIQHNTLAG
EGWRAVDTRK ALGIRSRDVH SNNSDAWVSR APKHWYTLLR RHPALIVWGL VALFPLAGWW
ARRRARRRPP QHPYPESELL VRRLTGGTMR PDPAFSGIPD QRTESSAAHS PAGTALPRVP
AERYPTPGRV RPAPARADTG VLAPAAPVLT AASPAGGALD VQPAPGGRAR SGSRRRAGAA
EPGRSPAKRS RSATAGSDDT AALRTGGSGT GHSGTGDLDG DRSGTDDAGA ALSPAATLTP
AAAPISEDAH PTLRGLRFYR TPRDLSVGPD MSAGEVTTEI TTRPFDGADH LAGPAQWPRA
EWEQTPEPDP YWSGDQGPDG QWSDGQWSDG RITSAPIPDT RQPMADHGAQ PAMSKPGPDG
DENLEIIDPV GTAPGRRRRR PKGGNSR
|
|---|
| |