Gene Franean1_7252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7252 
Symbol 
ID5675553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8854555 
End bp8855157 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content76% 
IMG OID641246089 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001511477 
Protein GI158318969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.134508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0511249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGA TCGCGGGCCG GGCCGCCCGG CTGGCTCTGG TCACCGCGGC GCTCTGGGTG 
CTCGCCGGGG CGGAGAGCCC GGGGGCCCTC GGCGCCACGA GCGCACCACC GCCCCCGGCC
GATGTGCCCG CCGAGGAGAT CACCCGTTCG GTGCGCCCGC TCGACGCCGC CGGCTCGGTC
CTCACCATCG ACCCGGCGGA CTCCGTGCTC CCGCTGGTCA CCGAGGAACG GTCCGGCGAC
CGGGTCACCG TCACGATCAG CGCGGACGTC CTGTTCGCCT TCGACTCCGA CGATCTGACC
GAGGCCGCGC GCACGGAGAT CGCCACGCTC GCGGGCCGGG TCGGCCCCGC CACCAGGACG
GTCACGGTTC TCGGCCACAC CGACAGCCTC GGCACCCCGG CCTACAACGT GATCCTCTCG
CAGCGCCGGG CCAACGCGGT CGCGGATCTG CTCCGCCCAG CCGTACCGAG CGGCACGCGC
GTCTCGGCTA CGGGCCGCGG CGGAGCCGAC CCCGTCGCGC CGAACACCCG GCCCGACGGG
TCCGACGACG CCGCTGGGCG CGCGCTGAAC AGGCGGGTCC AGATCAGCTT CCTGGCCAGC
TGA
 
Protein sequence
MTAIAGRAAR LALVTAALWV LAGAESPGAL GATSAPPPPA DVPAEEITRS VRPLDAAGSV 
LTIDPADSVL PLVTEERSGD RVTVTISADV LFAFDSDDLT EAARTEIATL AGRVGPATRT
VTVLGHTDSL GTPAYNVILS QRRANAVADL LRPAVPSGTR VSATGRGGAD PVAPNTRPDG
SDDAAGRALN RRVQISFLAS