Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_7252 |
Symbol | |
ID | 5675553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8854555 |
End bp | 8855157 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641246089 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001511477 |
Protein GI | 158318969 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.134508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0511249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCGA TCGCGGGCCG GGCCGCCCGG CTGGCTCTGG TCACCGCGGC GCTCTGGGTG CTCGCCGGGG CGGAGAGCCC GGGGGCCCTC GGCGCCACGA GCGCACCACC GCCCCCGGCC GATGTGCCCG CCGAGGAGAT CACCCGTTCG GTGCGCCCGC TCGACGCCGC CGGCTCGGTC CTCACCATCG ACCCGGCGGA CTCCGTGCTC CCGCTGGTCA CCGAGGAACG GTCCGGCGAC CGGGTCACCG TCACGATCAG CGCGGACGTC CTGTTCGCCT TCGACTCCGA CGATCTGACC GAGGCCGCGC GCACGGAGAT CGCCACGCTC GCGGGCCGGG TCGGCCCCGC CACCAGGACG GTCACGGTTC TCGGCCACAC CGACAGCCTC GGCACCCCGG CCTACAACGT GATCCTCTCG CAGCGCCGGG CCAACGCGGT CGCGGATCTG CTCCGCCCAG CCGTACCGAG CGGCACGCGC GTCTCGGCTA CGGGCCGCGG CGGAGCCGAC CCCGTCGCGC CGAACACCCG GCCCGACGGG TCCGACGACG CCGCTGGGCG CGCGCTGAAC AGGCGGGTCC AGATCAGCTT CCTGGCCAGC TGA
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Protein sequence | MTAIAGRAAR LALVTAALWV LAGAESPGAL GATSAPPPPA DVPAEEITRS VRPLDAAGSV LTIDPADSVL PLVTEERSGD RVTVTISADV LFAFDSDDLT EAARTEIATL AGRVGPATRT VTVLGHTDSL GTPAYNVILS QRRANAVADL LRPAVPSGTR VSATGRGGAD PVAPNTRPDG SDDAAGRALN RRVQISFLAS
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